FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807451

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807451
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences132570
Sequences flagged as poor quality0
Sequence length150
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAAAACAGAGTCACAGTCCCCAGTCAATTCCCAGACATAAGCCAGT127669.62962962962963No Hit
CATAGAGAGATTTTGGGCTGAGACGATGAGGTTTTCTAAATATACAATCA83826.322697442860376No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG79686.01040959493098No Hit
CATAGAAACCCCAAAGGCTATGTTCATTCTATGCCTTCATTCTGCCTGCA45563.4366749641698724No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA41503.1304216640265516No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGCGTT39142.952402504337331No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC31132.3481934072565434No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA30902.330844082371577No Hit
CATAGATGTCCATCATGTGGAAGCTGGAGAGTCACTTCTTTTGATAATTC29532.227502451535038No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT28742.167911292147545No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT26401.9914007694048428No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA25811.9468959794825376No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA25231.9031455080334918No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA24161.8224334313947348No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT22301.6821301953684846No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG20491.5455985517085313No Hit
CATAGAGGATCCCATCTGAGTTGGTCAAAGTCTGTGAGTAAAGTGCTAAT19911.5018480802594856No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATATGTCTTTATCAGCAGCATT18561.4000150863694651No Hit
CATAGACCAATAAAAGTTGATGGGATGAAGTAAGAAACATTTTAGAGCAC18261.3773855321716828No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT15671.1820170475974956No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT13160.9926831108093837No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC12570.9481783208870785No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG12020.9066908048578111No Hit
CATAGACACCATGCCTGGCTAATTTTTTTGTGTTTTTGGTAGAGATGGGG11820.8916044353926228No Hit
CATAGAGCTGGCTTCCTAACTTCCAACCTTCCAGCAAGCCTATTAACCTT11200.8448366900505393No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTAATCTGTGAGTTGCTGATGC10390.7837368937165271No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTT8430.6358904729576828No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA8340.629101606698348No Hit
CATAGAGATGTTTGATAAGCAGGGTGACTAGAGTTAATGGTAATTTATTG7930.5981745492947123No Hit
CATAGAGGATCCCATCTGAGTTGGTCAGTGTTATCCCCAGAAATGTTAGC7890.5951572754016746No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGACACTGACTGATACAGGAAG7830.5906313645621182No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTATCCCCAGAAATGTTA5680.428452892811345No Hit
CATAGATGAAAGCCTGTTGAATTTATGACATTTTTTATTCTCTCTCTTCA5570.4201553896054915No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT5410.40808629403334085No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG5280.39828015388096855No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA5120.38621105830881797No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATTCTGTTATTCAAAGGTTT4950.37338764426340804No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT4810.3628271856377763No Hit
CATAGATCATGGGACTTCAGCATGGCCAACGTGGTGAAACTCTGTCTCTA4750.35830127479821977No Hit
CATAGATCATGGGACTTCAGCATGGCCAACAAGGTGAAACCCCATCTCTA4550.3432149053330316No Hit
CATAGAGCAACAGGGACTCTCATTCACTGCTGGTGGGAATGCAAACTGGA4520.3409519499132534No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTGTTATTCAAAGGTTTTCTGC4380.33039149128762163No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT4350.3281285358678434No Hit
CATAGATTCTGAAGAAATCAGATAGAGAGAAACAAATATGCTCCAAATTT4280.3228483065550275No Hit
CATAGATGCCCTTTTTGTGTACTTCCATAGAAATCTGACATTTCTCATAA4150.3130421664026552No Hit
CATAGACACCATGCCTGGCTAATTTTTACGGTTGCACAGATCATTTAAGC3940.2972014784642076No Hit
CATAGATTGGAACTTTGCCAGCCTTACCAATATGGAGAAACCCATCTCTA3810.2873953383118352No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC3780.28513238289205706No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGATCTATCCAGGAATTTT3690.27834351663272233No Hit
CATAGATGTATACAAGCTGTCACAGACAACAAGCAATGGGGAAAGGATTC3610.27230896884664707No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG3580.27004601342686885No Hit
CATAGACCTGGGCTTAGGGGCTATACATTCAGGAGAAGTGGCATCTATGT3550.26778305800709057No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC3510.26476578411405294No Hit
CATAGATCCTCTCATTGTCCAGTTTGGCCTCCTGGTCGCTCAATTGTGTT3420.25797691785471827No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACTGATACAGGAAG3320.25043373312212414No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA3230.24364486686278947No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA2970.2240325865580448No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAAATATACAATCA2970.2240325865580448No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT2840.2142264464056725No Hit
CATAGAACACAGAGTCACAGTCCCCAGTCAATTCCCAGACATAAGCCAGT2650.1998943954137437No Hit
CATAGAGAGATTTTGGGCTGAGACAATGAGGTTTTCTAAATATACAATCA2570.1938598476276684No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTCAGTACAAAATTTCTC2390.18028211510899902No Hit
CATAGAGAGATTTTGGGCTGAGACGACACACTGACGACATGGTTCTACAC2350.1772648412159614No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT2280.1719846119031455No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCTGTCTAC2260.1704759749566267No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACTCCATCTCTA2170.163687108697292No Hit
CATAGATCATGGGACTTCAGCATGACGGTGTTTGCAGATTTGGACCTGCG2120.15991551633099493No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT2110.15916119785773553No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA2080.1568982424379573No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAATGGGCAAGCAA1940.14633778381232557No Hit
CATAGAGCGATTTTGGGCTGAGACGATGAGGTTTTCTAAATATACAATCA1880.1418118729727691No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTATCCCCAGAAATGTTAG1870.14105755449950969No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT1860.14030323602625028No Hit
CATAGATGTCCATCATGTGGAAGCTGCACTGACTGATACAGGAAGGCCTT1820.13728596213321265No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG1820.13728596213321265No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG1770.1335143697669156No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGACGAAACCCCGTCTCTA1740.13125141434713736No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1650.12446254808780267No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA1640.12370822961454327No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCGTACAATGGGCAAGCAATG1630.12295391114128386No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACA1630.12295391114128386No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT1530.11541072640868974No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA1460.11013049709587387No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA1440.10862186014935506No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC1430.10786754167609565No Hit
CATAGATGCCCTTTTTGTGTACTTCCACATAGATGCCCTTTTTGTGTGCT1410.10635890472957682No Hit
CATAGAGAGATTTTGGGCTGAGACGACGGGGTTTTCTAGATATACACTCA1390.104850267783058No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGTACGGTAGCAGAATTACCTC1380.1040959493097986No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA1370.10334163083653919No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTGCT1340.10107867541676095No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)