FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807453

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807453
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences97577
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG66006.76388903122662No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG58916.037283376205458No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC55795.7175358947292905No Hit
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA48845.005277883107699No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG44914.602519036248296No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC40324.132121299076626No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA36963.787777857486908No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA28582.9289689168554065No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG26152.679934820705699No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT23622.420652407842012No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA21782.232083380304785No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT19221.969726472426904No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC18011.845721840187749No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA17521.7955050882892485No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA16231.6633018026789101No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC16071.6469044959365422No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT15811.6202588724801952No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT14151.4501368150281315No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA10621.0883712350246473No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG9791.0033102062986154No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACCAGTGAAGCAGAGCTTCCCA9210.9438699693575331No Hit
CATAGAAGGACAAAGACATTTAGGACCCCTGCAGTCTTTGGAGGAATCTA7540.7727230802340715No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT7300.7481271201205202No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGACGCTATACCACACTACA6920.7091835166073973No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGCTATACCACACTACA6630.6794633981368561No Hit
CATAGACACAACAGAGAGAACGGGCTCCGAGGTCAGGAAGGAACCTGCTC6480.6640909230658864No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG6460.6620412597230905No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA5720.5862037160396405No Hit
CATAGACAGTGCCTTTGTGCGTGTTACACTGACGATCATTGTTCACTGCA5590.5728809043114669No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT5110.5236889840843642No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG4890.5011426873136087No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTGCTTCTTGTGGTAACTGGTC4630.4744970638572614No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC3860.3955850251596176No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT3810.39046086680262765No Hit
CATAGACCCAGATGCTGTCCCACTAACTATAAGCCATAGGACAATGAATC3710.38021255008864796No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG3570.36586490668907634No Hit
CATAGACCTCCGACAGTTTTTATGCACACACTGCCCTCTCTGCTGTTCCT3550.3638152433462804No Hit
CATAGAAATGATGCTGAAGGGCCTGCATAGAAATGATGCTGAAGTGATGG3230.33102062986154523No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG3220.32999579819014724No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGAGGAGCTGAGTCATGGG3200.3279461348473513No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG3170.32487163983315737No Hit
CATAGACGTGACTAAAAGCATGTTGGTCCCAACTGTCTCTGAAAAATTTC3160.3238468081617594No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT3150.32282197649036143No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA3130.3207723131475655No Hit
CATAGAGAAGACTCCCTCAACCCACCCTGACGCTATACCACACTACACAC3070.3146233231191777No Hit
CATAGACCAGCAGACACTCCCATCATGTTCTACAAAGGATTCTGGGCCAT3050.31257365977638174No Hit
CATAGAAGGACAAAGACATTTAGGACCCCTCAGAGATCCCACCATTTGCC3040.31154882810498374No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACACATAGAAATGATGCTGAAGT3020.3094991647621878No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGATCATTGTTCACTGC2740.28080387796304457No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCCCAACTGTCTCTGAAAAATTTCT2740.28080387796304457No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT2720.27875421462024863No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTGCATGACAGAGCGAGACTTCTA2620.2685058979062689No Hit
CATAGACTTGAAAGTGATAACTGAGAGGTAAACACACTGCCCTCTCTGCT2610.26748106623487095No Hit
CATAGAAGGACAAAGACATTTAGGACCCTACACTGCCCTCTCTGCTGTTC2590.265431402892075No Hit
CATAGAAATGATGCTGAAGGGCCTGCAATGATGCTGAAGTGATGGGCTAG2480.25415825450669727No Hit
CATAGACGGATTATTCTCTCCATGGTCTACACTGACGCTATACCACACTA2460.25210859116390133No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGCAGAAGTAGGAAGTATTAC2420.24800926447830943No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGCCCTCTCTGCT2410.24698443280691146No Hit
AAGGATTCTGGGCCATCTATGAGACCAAGTCTCTGCTACCGTAAAGTGCG2270.23263678940733984No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGATCATTGTTCAC2250.2305871260645439No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGCCCTCTCTGCTGTTCCTT2180.2234133043647581No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCACTGACGATCATTGTTCACT2150.22033880935056419No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT2100.2152146509935743No Hit
CATAGACCTCCGACAGTTTTTATGCACACACTGACGCTATACCACACTAC2090.21418981932217634No Hit
CATAGATCACGTAGAAACTGGAGAGGCCAGTGCAGTGGGGAGGCAGGCTG2090.21418981932217634No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT2090.21418981932217634No Hit
CATAGATGGCCAAGATACGAGCACATATAGAAATGATGCTGAAGTGATGG2040.20906566096518647No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG2010.20599116595099257No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTAGGCTAATCTGAAATCTT1920.19676768090841082No Hit
CATAGACGGATTATTCTCTCCATGGTCTACAAAGGATTCTGGGCCATCTA1890.19369318589421688No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG1790.18344486918023714No Hit
CATAGAGTCCAACTATTCCAGCACCACGCTGTCCTTCTCTGAATCTATGA1670.1711468891234615No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTACCAGTTATTAGTTGAATGA1600.16397306742367565No Hit
CATAGAGTGCCTGTTTCCTCATTCGTAGAGTGTCTGTTTCCCCACTCAAA1530.15679924572388984No Hit
CATAGAGAAGACTCCCTCAACCCACCACGCTGTCCTTCTCTGAATCTATG1520.15577441405249187No Hit
CATAGATGGCCAAGATACGAGCACATAGAGATCCCACCATTTGCCATCTA1490.15269991903829797No Hit
CATAGAAATGATGCTGAAGGGCCTGTCATTGTCGCTGTCCCATCTATGAG1460.14962542402410403No Hit
CATAGACCGCTTCCCAATTTTTGTAACAACACTGACGACATGGTTCTACA1410.1445012656671142No Hit
CATAGAAAAAACAGTTGGCCAGGCATGGCTCAGGTATGTCTTTATTAGCT1350.13835227563872635No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGTCCCAACTGTCTCTGA1330.1363026122959304No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGGCCCTGCAGTCTTTGGAG1320.13527778062453244No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA1310.13425294895313444No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG1300.13322811728173647No Hit
CATAGAGTGCCTGTTTCCTCATTCGTACACTGACGACATGGTTCTACACA1300.13322811728173647No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC1290.1322032856103385No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGTGTCTGCCTCTAAGTAAA1290.1322032856103385No Hit
CATAGAGTGTCTGTTTCCCCACTCAAATACCATCTATGAGACCAAGTCTC1280.1311784539389405No Hit
CATAGACCAGCAGACACTCCCATCATTCAGACTCACAAATGAGAAACCTG1260.12912879059614457No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCATTGTCGCTGTCCCATCTA1260.12912879059614457No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACAAATGAGAAACCT1230.12605429558195066No Hit
CATAGAAATGATGCTGAAGGGCCTGCGAAATGATGCTGAAGTGATGGGCT1230.12605429558195066No Hit
CATAGAAATGATGCTGAAGGGCCTGCATAAGCCAAACAATATAAAAGTCC1210.12400463223915471No Hit
CATAGACATTTAATCCTCACAATGACCCATTGCTTCTTGTGGTAACTGGT1130.11580597886797094No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA1090.11170665218237905No Hit
CATAGAAATGATGCTGAAGGGCCTGGTTCTACACATAGAAATGATGCTGA1060.10863215716818513No Hit
CATAGACCAGCAGACACTCCCATCATTCAGACTCTATGTGTAGAACTCCG1040.10658249382538919No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGACATGGTTCTACAAA1040.10658249382538919No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)