FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807455

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807455
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences121993
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC109568.980843163132311No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA87667.185658193502905No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC82606.77088029641045No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA71115.829022976728173No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA51584.228111449017566No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT47223.870713893420114No Hit
CATAGAGCATCCTCGTAATAGCAAACATTCCAACTCTATAGATTATGCTC34112.796062069135114No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC33942.7821268433434705No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT29682.4329264793881618No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA28292.3189855155623684No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA27012.214061462542933No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG23461.923061159246842No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA23331.9124048101120557No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA20391.6714073758330394No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA19711.6156664726664647No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT18401.5082832621543858No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC17691.4500832014951677No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG15911.304173190265015No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC14121.1574434598706485No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT13681.1213758166452175No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA12000.9836629970572083No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG11640.954153107145492No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT10140.8311952325133409No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG9930.8139811300648397No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG9660.7918487126310526No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA9540.7820120826604805No Hit
CATAGAAGGGCAATTATCTCATCCTAGACCTTTTAGCTATTAAGATGTTG9320.763978261047765No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGATGACTTATGGAATCTGA8070.6615133655209725No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC7820.6410203864156141No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT6650.5451132442025363No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT6520.5344568950677497No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA6310.5172427926192487No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT6240.5115047584697483No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC6100.5000286901707475No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG5930.48609346437910367No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT5510.4516652594821014No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT5430.4451075061683867No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA5420.4442877870041724No Hit
CATAGAATTGCCTACTTTGGGACCCAAGTATATGACACATTACACCAGTC5300.43445115703360027No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC5250.43035256121252863No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA5160.42297508873459955No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA5050.4139581779282418No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGAAAATGTCAGTGGGCCAT4790.3926454796586689No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC4740.3885468838375972No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA4580.37543137721016784No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT4340.3557581172690236No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG4340.3557581172690236No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA4280.35083980228373757No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA3850.315591878222521No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTCTCTTCCGCCTTTATCCTTCT3720.3049355290877345No Hit
CATAGACCCCCATGCAACCACATCTATACAAGCACATTATTATTGGTTGG3430.28116367332551867No Hit
CATAGACCCCCATGCAACCACATCTATACAATGGGCACACTTAACACCTC3400.27870451583287564No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG3380.277065077504447No Hit
CATAGAAGGGCAATTATCTCATCCTAGACAGGGCAAGTGTATGGTCAGTT3360.2754256391760183No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT3360.2754256391760183No Hit
CATAGACCCACTTACACACACAGGTTTGGGGGAAGAGAAACAGAATCTAT3250.26640872836966056No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA2850.23361996180108696No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT2810.23034108514422957No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA2760.22624248932315788No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT2700.22132417433787183No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT2460.2016509143967277No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCCCAAGTATATGACACATTACACC2300.18853540776929822No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG2270.1860762502766552No Hit
CATAGACCCCCATGCAACCACATCTAACAATGGGCACACTTAACACCTCT2260.1852565311124409No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTATTTAAATGTTAGCTGTC1970.161484675350225No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA1890.1549269220365103No Hit
CATAGATGTGTGAGAGAGGGAGAGACATGCCAGCCTTCTCTGATACCATC1860.15246776454386726No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA1850.15164804537965293No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG1840.1508283262154386No Hit
CATAGAATTGCCTACTTTGGGACCCATCGGCCGCACTGAAATTGTCTATG1700.13935225791643782No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT1620.13279450460272313No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT1600.1311550662742944No Hit
CATAGACCCCCATGCAACCACATCTATAGTCACTCAAATATAGACCTCAA1550.12705647045322274No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC1460.11967899797529367No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGAATTAGAGCCAGTTCTGA1430.11721984048265065No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT1380.11312124466157894No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1220.1000057380341495No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGGGCAAGTGTATGGTCAGTTCT1220.1000057380341495No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA1220.1000057380341495No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)