FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807456

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807456
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences121993
Sequences flagged as poor quality0
Sequence length150
%GC34

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG112109.189051830842754No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT87297.155328584426976No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG82436.756945070618806No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT71795.884763879894748No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT51784.244505832301853No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT46143.782184223684965No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC34502.8280311165394734No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAATGTTTGCTATTACGAGGA33862.775569090029756No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT31032.5435885665570974No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT28142.306689728099153No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT26762.1935684834375744No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG23661.9394555425311286No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT22871.8746977285581958No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT20121.6492749583992525No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC19741.6181256301591076No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT18301.5000860705122425No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG17931.469756461436312No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG16011.3123703819071586No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG14301.1721984048265066No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT13411.09924339921143No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT11790.9664488946087071No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG11740.9623502987876354No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT9990.8188994450501258No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG9900.8115219725721967No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG9720.7967670276163387No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT9500.7787332060036232No Hit
CATAGAACCAACATCTTAATAGCTAAAAGGTCTAGGATGAGATAATTGCC9260.759059946062479No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTCTGCTTTTACAAACTCAAGT7930.6500372972219718No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC7750.6352823522661136No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT6650.5451132442025363No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT6480.5311780184108925No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT6220.5098653201413196No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC6120.5016681284991762No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT6080.4983892518423188No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG5800.4754371152443173No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT5440.44592722533260104No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT5430.4451075061683867No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT5420.4442877870041724No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA5250.43035256121252863No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTCCCAAAGTAGGCAATTC5250.43035256121252863No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC5160.42297508873459955No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT5090.4172370545850991No Hit
CATAGATGGCCCACTGACATTTTCCTCTGCTTTTACAAACTCAAGTGATT4740.3885468838375972No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT4620.37871025386702517No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC4450.36477502807538137No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT4390.3598567130900953No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA4340.3557581172690236No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA3940.32296935070045No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT3840.31477215905830663No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATTCTTTCTCCAGACCTTCATCT3660.3000172141024485No Hit
CATAGAACCAACCAATAATAATGTGCTTGTATAGATGTGGTTGCATGGGG3430.28116367332551867No Hit
CATAGAACTGACCATACACTTGCCCTGTCTAGGATGAGATAATTGCCCTT3410.27952423499709No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG3410.27952423499709No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT3400.27870451583287564No Hit
CATAGATTCTGTTTCTCTTCCCCCAAACCTGTGTGTGTAAGTGGGTCTAT3220.26394957087701754No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTATAGATGTGGTTGCATGGGGGTC3220.26394957087701754No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT2950.24181715344323032No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT2710.2221438935020862No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT2680.21968473600944316No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTAGAATCTTGAACTCAGGAGTCT2640.21640585935258583No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC2390.1959128802472273No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGACACTTGAAAGCTCCCTG2300.18853540776929822No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG2270.1860762502766552No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTAGATGTGGTTGCATGGGGGTCT2210.18115793529136917No Hit
CATAGAAACTCTGAGACAGCTAACATTTAAATACACTGCTCACGATGGTA1940.159025517857582No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT1890.1549269220365103No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA1860.15246776454386726No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGGCATGTCTCTCCCTCTCTCACA1830.15000860705122426No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC1800.14754944955858124No Hit
CATAGACAATTTCAGTGCGGCCGATGGGTCCCAAAGTAGGCAATTCTATG1680.13771281958800916No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT1600.1311550662742944No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTATAGATGTGGTTGCATGGG1540.12623675128900838No Hit
CATAGAACCTCAAGCCGGAAAACCTGTGTGTGTAAGTGGGTCTATGTGTA1480.12131843630372235No Hit
CATAGACTCAGAACTGGCTCTAATTCCTCTGCTTTTACAAACTCAAGTGA1430.11721984048265065No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT1360.11148180633315026No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG1270.1041043338552212No Hit
CATAGAACTGACCATACACTTGCCCTGGATCTCAGAGTTAGCTTGCCTCT1220.1000057380341495No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)