FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807457

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807457
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences182955
Sequences flagged as poor quality0
Sequence length150
%GC35

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA1862410.179552348938262No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC130467.130715203192042No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG113056.179115082943893No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC104655.719985788855183No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG103235.642371074854472No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC103045.63198600748818No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA89504.891913312016616No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA77634.2431198928698315No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA62023.3899046213549777No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG61163.3428985269601816No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA55313.0231477685769725No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT48342.6421797709819352No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG46942.5656582219671504No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA36642.0026782542155175No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT30051.6424803913530648No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG23651.2926675958569047No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT20391.114481703151048No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG14830.8105818370637589No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT13540.7400726954715641No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG10980.6001475772730999No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT10960.5990544122871745No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGCTAATCTGAAATCTTCGTGT9610.5252657757372031No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA8970.4902844961875871No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC8880.4853652537509224No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT8470.4629553715394496No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG8110.4432784017927906No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGCTATACCACACTACA5680.31045885600284223No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC5500.30062037112951273No Hit
CATAGAGCTTGGGCGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA5050.276024158946189No Hit
CATAGAGTCCAACTATTCCAGCACCACGCTGTCCTTCTCTGAATCTATGA5020.2743844114673007No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT4820.2634527616080457No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT4690.25634718919953No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA4650.25416085922767895No Hit
CATAGATCAAGGAAAACACCAGCCCATGCAAACTGTTCTAGGCAGAAGAA4460.24377579186138668No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC4390.2399497144106474No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT4310.2355770544669454No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG4220.23065781203028068No Hit
CATAGAGTCTGAATGGTGGGAGAGTGATAGGCTTAGAGGGCTTGCTCTAT4090.2235522396217649No Hit
CATAGACCAACATTTCTTCTCCCAGGGTTCTCCCAAGTATTAGAGCAAGT3710.20278210488918041No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG3670.20059577491732938No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA3590.19622311497362738No Hit
CATAGACGGATTACTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC3460.18911754256511165No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAAAATGATGCTGAAGTGATG3420.18693121259326062No Hit
CATAGAGCTTTTTTTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG3330.18201197015659587No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT3300.18037222267770764No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA3260.17818589270585664No Hit
CATAGATGTTTTACCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC3210.1754529802410429No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA3200.17490639774808012No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGATCATTGTTCACTGC3080.16834740783252714No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTTTTTGTGCACCTTCATTGTT3050.16670766035363888No Hit
CATAGAGAAGACTTCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG3040.16616107786067613No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA2980.1628815829028996No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGTCTGTTTCCCCACTCAAATACCA2900.1585089229591976No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG2820.1541362630154956No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCATTGTCGCTGTCCCATCTA2820.1541362630154956No Hit
CATAGATGTTTTACCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC2810.15358968052253286No Hit
CATAGAAATGATGCTGAAGGGCCTGTGCTGAAGTGATGGGCTAGATCTAT2750.15031018556475637No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT2720.1486704380858681No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG2630.14375119564920336No Hit
CATAGAGTGCCTGTTTCCTCATTCGTAGAGTGTCTGTTTCCCCACTCAAA2500.1366456232406876No Hit
CATAGAAATGATGCTGAAGGGCCTGGATGCTGAAGTGATGGGCTAGATCT2330.12735372086032085No Hit
CATAGACGGATTATTCTCTCCATGGTCTGCCCTCTCTGCTGTTCCTTCTA2270.12407422590254434No Hit
CATAGAAATGATGCTGAAGGGCCTGGTTCTACACATAGAAATGATGCTGA2210.12079473094476784No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGGTCATCAGGAACCATGGG2200.12024814845180509No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACCAGTGAAGCAGAGCTTCCCA2200.12024814845180509No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT2160.11806181847995409No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC2110.11532890601514034No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGGTCCCAACTGTCTCTG1940.10603700363477357No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)