FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807460

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807460
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences154985
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT152999.871277865599897No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG87935.673452269574475No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA85415.510855889279608No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG79895.1546923895860886No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG68484.418492112139885No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG59833.860373584540439No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC50143.235151788882795No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG49323.1822434429138307No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA37502.4195889924831437No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG34742.2415072426363842No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA32312.084717875923477No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT30921.995031777268768No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG26531.711778559215408No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC26271.695002742200858No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA25051.6162854469787398No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT19731.273026421911798No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT19601.264638513404523No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT19381.2504435913152887No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT17631.137529438332742No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT16601.0710713940058716No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG13310.8587927863986837No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTCCTAAATGTCTTTGTCCTTCTA12110.7813659386392231No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC11930.769751911475304No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT11240.7252314740136143No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC10840.6994225247604606No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT10740.6929702874471723No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT10660.6878084975965416No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG10230.6600638771494015No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT9200.5936058328225312No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC8670.5594089750621029No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG8340.5381165919282511No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG8340.5381165919282511No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG8180.5277930122269897No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT8160.526502564764332No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG7540.4864986934219441No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT6960.4490757170048714No Hit
CATAGACCCTCTCTTACCCTTCCACCCACACCAACATGCTTTTAGTCACG6840.44133303222892534No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT6830.4406878084975965No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC6480.41810497790108725No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTACGAATGAGGAAACA6200.40003871342387975No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA5980.3858437913346453No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT5290.3413233538729554No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT5190.33487111655966706No Hit
CATAGACCAGTACGCCTTACCCCTTGGGCTGGTGTTTTCCTTGATCTATG4900.31615962835113076No Hit
CATAGATTCAGAGAAGGACAGCGTGGTGCTGGAATAGTTGGACTCTATGT4830.31164306223182886No Hit
CATAGAATCTGGTTCAAGCACACAGTGTAACTGGCTTGATTGCACCTTTC4160.2684130722327967No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTATGTGCTCGTATCTTGGCCAT4120.2658321773074814No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACGAATGAGGAAACAGG4120.2658321773074814No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGGGTCATTGTGAGGA4090.26389650611349486No Hit
CATAGAGCAACCCCAGCAGTTTGAGACCATGGAGAGAATAATCCGTCTAT3810.24583024163628736No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG3780.24389457044230087No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG3620.23357099074103946No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG3460.22324741103977802No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG3370.2174403974578185No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAGTAAAG3270.21098816014453012No Hit
CATAGACCAGTACGCCTTACCCCTTGTTGTCTTTATGGTGTCCTCATCTA3190.2058263702938994No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA3140.20260025163725523No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACCTCCTCTATGTGT2920.18840532954802078No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG2700.17421040745878635No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG2530.16324160402619609No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCAAGATGAGCATGCCTTT2320.1496919056682905No Hit
CATAGATCTCCTCTCTGTAATGCACCAACATGCTTTTAGTCACGTCTATG2300.1484014582056328No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGCAGGCCCTTCAGC2210.14259444462367327No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGCAGGCCCT2160.13936832596702906No Hit
CATAGAATCTGGTTCAAGCACACAGTAGATGCCTGGCCAACTGTTTTTTC2100.13549698357905604No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCATGTCGTCAGTGTGGG2060.1329160886537407No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGTGGGTTGAGGGAGTC1990.12839952253443881No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC1950.12581862760912346No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCGGAGGTCTATGTGTAG1930.12452818014646579No Hit
CATAGAGCTAATAAAGACATACCTGAGCCACATGCCTGGCCAACTGTTTT1860.12001161402716391No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCTCCCATGATTTACCATC1840.11872116656450624No Hit
CATAGATTCCTCCAAAGACTGCAGGCCCTTCAGCATCATTTCTATGTGTA1820.11743071910184856No Hit
CATAGAACTTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG1810.11678549537051973No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGAAGAAATGTTGGTCTATGTA1790.11549504790786205No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACTGTCAT1780.11484982417653321No Hit
CATAGATCTAGCCCATCACTTCAGCACAGGCCCTTCAGCATCATTTCTAT1760.11355937671387553No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTAGCAGGCCCTTCAGCA1760.11355937671387553No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC1720.11097848178856018No Hit
CATAGACCTCCCATGGTTCCTGATGACCTCCCATGATTTACCATCACAAA1720.11097848178856018No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGC1710.11033325805723133No Hit
CATAGATCTAGCCCATCACTTCAGCATCCAGGCCCTTCAGCATCATTTCT1670.10775236313191598No Hit
CATAGATGGCCCAGAATCCTTTGTAGACCCATTGTAGATTTCTTTCACCT1660.10710713940058716No Hit
CATAGAACACGAAGATTTCAGATTAGCCTGTTCTACACATAGATGCCTGG1600.10323579701261414No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)