FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807461

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807461
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences152912
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC101586.643036517735691No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC75894.962985246416239No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA73634.815187820445747No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA72344.730825572878518No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA44632.9186721774615463No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA41512.7146332531129014No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA40052.6191535000523176No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT39692.595610547242859No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA38092.4909752014230406No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT30191.9743381814376897No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA25531.6695877367374699No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG23131.512634718007743No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC22181.450507481427226No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT22111.445929685047609No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA21971.4367740922883752No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA18151.1869572041435597No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC15681.0254263890342157No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT14970.9789944543266714No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG14100.9220989850371456No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT14100.9220989850371456No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG14040.9181751595689024No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC12990.8495082138746468No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG12080.7899968609396254No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT11760.7690697917756618No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG11700.7651459663074186No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT11670.7631840535732971No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA11660.7625300826619232No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC11360.7429109553207074No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA9870.6454692895260019No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA9700.6343517840326462No Hit
CATAGATGCACCAGAAGCCACCTACCCCTTTACCTACCTTCTCAGCTCTA9620.6291200167416553No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG9480.6199644239824212No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA9100.5951135293502146No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG9040.5911897038819713No Hit
CATAGAACCCTGCTTCCTAAATCAACAATGGGCACACTTAACACCTCTAT8910.5826880820341112No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT8480.554567332845035No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT7990.5225227581877159No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT7880.5153290781626033No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA6820.446008161556974No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC6400.41854138327927176No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT6160.4028460814062991No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG6030.39434445955843883No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA5740.3753793031285968No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA5550.36295385581249345No Hit
CATAGACCCCCATGCAACCACATCTATGAGTCACTCAAATATAGACCTCA5330.3485664957622685No Hit
CATAGATTTGGCACTCACATACACGCTCTCTTCCGCCTTTATCCTTCTAT5220.341372815737156No Hit
CATAGATGCACCAGAAGCCACCTACCTTCCCCCTTTACCTACCTTCTCAG5180.3387569320916606No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA5160.33744899026891284No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT4900.3204457465731924No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA4800.3139060374594538No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTAGTCACTCAAATATAGAC4650.30409647378884586No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG4610.30148059014335044No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT4500.294286910118238No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA4500.294286910118238No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG4410.28840117191587317No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTGGGGGAAGAGAAACAGAATC4320.2825154337135084No Hit
CATAGATGTCCCCATTCATCCTGCAACATGTCCCCTTTACCTACCTTCTC4250.2779376373338914No Hit
CATAGAGAAAGGCAGGCGAAGTTAGCTCTCTTCCGCCTTTATCCTTCTAT4220.2759757245997698No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA4180.27335984095427435No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA4130.27008998639740506No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT4040.2642042481950403No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT4040.2642042481950403No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT4020.26289630637229255No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA4010.2622423354609187No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGTGGTGCTGGAACTAGTTCTAT3920.2563565972585539No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA3910.2557026263471801No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG3830.2504708590561892No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT3770.246547033587946No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC3720.2432771790310767No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACAGCCCAGTTTTCCTTCTCT3540.2315057026263472No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3510.2295437898922256No Hit
CATAGATTTGGCACTCACATACACGCGTCAACTCCAGTCTCGGCAACAAG3510.2295437898922256No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA3380.22104216804436538No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTAGGAGTTCTGGCCCCTGTCT3370.22038819713299154No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA3340.21842628439886994No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA3040.19880715705765406No Hit
CATAGATCATGGGACTTCAGCATGGCCACTGACGACAATGGGCACACTTA3020.19749921523490635No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTCTCTTCCGCCTTTATCCTTCTAT2940.19226744794391545No Hit
CATAGACCATGTAATACCATCGTGAGCAGATCAGGAAAATGTCAGTGGGC2930.19161347703254158No Hit
CATAGATTGCCTCATTGTGCCAGACAATGGGCACACTTAACACCTCTATG2860.18703568065292456No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC2800.18311185518468137No Hit
CATAGATGCACCAGAAGCCACCTACCTTCCCCTTTACCTACCTTCTCAGC2800.18311185518468137No Hit
CATAGAAGGGCAATTATCTCATCCTAGACTAGAAGGGCAAGTGTATGGTC2790.18245788427330753No Hit
CATAGAGCAGTGCAGCAGAAGATAGCTCTCTTCCGCCTTTATCCTTCTAT2770.1811499424505598No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC2710.1772261169823166No Hit
CATAGATCTGGGAGGTGAAGAGGACAAGCACATTATTATTGGTTGGTTCT2700.17657214607094276No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCCTGGCAAAAGGGTAAGAGTTCTA2690.1759181751595689No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC2690.1759181751595689No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGGCAAGTGTATGGTCAGT2640.17264832060269958No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA2590.1693784660458303No Hit
CATAGATGTGTGAGAGAGGGAGAGACAAGCCTGGGCCCATAATACACTTT2530.1654546405775871No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT2480.16218478602071779No Hit
CATAGAATTGCCTACTTTGGGACCCATCGGCCGCACTGAAATTGTCTATG2470.16153081510934394No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCAAGTATATGACACATTA2410.1576069896411008No Hit
CATAGACCCCCATGCAACCACATCTATGGCTCTCTTCCGCCTTTATCCTT2380.15564507690697918No Hit
CATAGATTTGGCACTCACATACACGCCTGACGACATGGTTCCAACTCTAT2360.15433713508423147No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTTACCCCTTTACCTACCTTCTCA2350.1536831641728576No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTGGTGGTGCTGGAACTAG2260.14779742597049284No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGAATTAGAGCCAGTTCTGA2220.1451815423249974No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC2110.1379878622998849No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCCAAGTATATGACACATTACACCA2080.1360259495657633No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT2010.13144815318614628No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCAGGGCAAGTGTATGGTCAGTTCTA1960.12817829862927696No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTAGGAATTAGAGCCAGTTC1950.12752432771790312No Hit
CATAGATCATGAATGACTCCCACTCTGTTCCCTGGCAAAAGGGTAAGAGT1930.12621638589515538No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCTAGTTCCAACTCTATAGATTATG1920.1255624149837815No Hit
CATAGACAGTCCTGCCGTGTACATGTGTGTACAGCCTACATCCCTCATCT1900.1242544731610338No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAAGTATATGACACATTACACC1890.12360050224965993No Hit
CATAGAACCCTGCTTCCTAAATCAACAAGGGCATGGTCAAGTGTCTATGA1750.11444490949042585No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCAGCATGAGAAGAATGGC1740.11379093857905201No Hit
CATAGATCTGGGAGGTGAAGAGGACACACTGACGACATGGTTCTACACAT1740.11379093857905201No Hit
CATAGAGTCATTCCAAACTGTGCACTTCCATCAGAGCATCACCCCTTCTA1710.11182902584493042No Hit
CATAGACCCCCATGCAACCACATCTATAGTCACTCAAATATAGACCTCAA1700.11117505493355656No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT1690.11052108402218269No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG1650.10790520037668724No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATGTACAAACCAAACAATAG1640.10725122946531337No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG1620.10594328764256565No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGCAAAAGGGTAAGAGTTCTATG1620.10594328764256565No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGGGCAAGTGTATGGTCAGTTC1620.10594328764256565No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT1590.10398137490844406No Hit
CATAGACCCACTTACACACACAGGTTTACACTGACGACCTGGGCCCATAA1580.10332740399707022No Hit
CATAGATGCACCAGAAGCCACCTACCTTCTCAGCCAAGTATATGACACAT1580.10332740399707022No Hit
CATAGAGACCCCCAAGTAGCCTAACTGTGCCCTGTGATTGTCCTGGTCTA1550.10136549126294862No Hit
CATAGACAGAACACCACACCCCTGTCACACTGACGACAATGGGCACACTT1540.10071152035157477No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC1530.1000575494402009No Hit
CATAGACAGAACACCACACCCCTGTCCATAGATCTGGGAGGAACAGGGAG1530.1000575494402009No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)