FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807462

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807462
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences152912
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG108557.098854242963274No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG75074.909359631683582No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT73804.826305325939102No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT73614.813879878622998No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT44262.8944752537407137No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT41402.707439573087789No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT41392.706785602176415No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT39182.5622580307627913No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT39082.555718321649053No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT37342.4419273830700012No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT25281.6532384639531235No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG23621.5446792926650623No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG22711.4851679397300408No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT21701.4191168776812808No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT21681.4178089358585328No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT17951.1738777859160825No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT14550.9515276760489694No Hit
CATAGAACTAGTTCCAGCACCACCAGAGTGGGAGTCATTCATGATCTATG14080.9207910432143979No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG14080.9207910432143979No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG14020.9168672177461547No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC12770.8351208538244219No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG11890.7775714136235221No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT11700.7651459663074186No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG11680.7638380244846709No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT11550.7553364026368107No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT11540.7546824317254368No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT9900.6474312022601234No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA9730.6363136967667677No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC9700.6343517840326462No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG9550.6245422203620383No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC9500.621272365805169No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTAGGTGGCTTCTGGTGCATCTA9350.6114628021345611No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG9010.5892277911478497No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTGATTTAGGAAGCAGGGTTCTAT8670.5669927801611384No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT8340.545411740085801No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT7870.5146751072512294No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT7850.5133671654284817No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC6630.4335827142408706No Hit
CATAGAACCTCAAGCCGGAAAACCTGTGTGTGTAAGTGGGTCTATGTGTA6430.4205032960133933No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG6130.40088416867217747No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC5830.3812650413309616No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG5590.3655697394579889No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT5540.3622998849011196No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTCATAGATGTGGTTGCATGG5360.3505284084963901No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT5300.3466045830281469No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGTGTATGTGAGTGCCAAATCTAT5050.33025531024380034No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGGAAGGTAGGTGGCTTCTGGTGC4940.3230616302186879No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT4770.31194412472533223No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT4660.3047504447002197No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTACACTGCTCACGATGGTAT4590.3001726483206027No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT4560.2982107355864811No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG4530.29624882285235954No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC4350.28447734644763No Hit
CATAGATTCTGTTTCTCTTCCCCCAAATGTTTGCTATTACGAGGATGCTC4300.2812074918907607No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTAACTTCGCCTGCCTTTCTCTAT4230.2766296955111437No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA4110.2687820445746573No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGACATGTTGCAGGATGAATGGGG4070.26616616092916184No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT4060.26551219001778803No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT4060.26551219001778803No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT3960.2589724809040494No Hit
CATAGAACTAGTTCCAGCACCACCAGGAGTTGACAAACGACAGCTTCTAT3960.2589724809040494No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT3950.2583185099926755No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG3920.2563565972585539No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT3860.25243277179031076No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT3780.24720100449931987No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA3720.2432771790310767No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC3680.24066129538558123No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGTAGAATCTTGAACTCAGGAGTCT3420.22365805168986083No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA3370.22038819713299154No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA3340.21842628439886994No Hit
CATAGACTTGTTGCCGAGACTGGAGTTGACGCGTGTATGTGAGTGCCAAA3330.2177723134874961No Hit
CATAGACAGGGGCCAGAACTCCTAAGAAAGAAAACCCACAAAAGACGTCT3300.2158104007533745No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC3150.20600083708276656No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3030.1981531861462802No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGGCCATGCTGAAGTCC2970.19422936067803703No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCAGCTCCTCTTCTCTTCCCTCTAT2890.18899759338704616No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTGGCACAATGAGGCAATCTATG2850.1863817097415507No Hit
CATAGATGGCCCACTGACATTTTCCTGATCTGCTCACGATGGTATTACAT2850.1863817097415507No Hit
CATAGAACTGACCATACACTTGCCCTTCTAGTCTAGGATGAGATAATTGC2790.18245788427330753No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC2770.1811499424505598No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCCTCTTCACCTCCCAGATCT2750.17984200062781208No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTATCTTCTGCTGCACTGCTCTAT2700.17657214607094276No Hit
CATAGAACTCTTACCCTTTTGCCAGGACACTTGAAAGCTCCCTGGATCTA2700.17657214607094276No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG2700.17657214607094276No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGAAGGTAGGTGGCTTCTGGTGCA2670.17461023333682119No Hit
CATAGAACTGACCATACACTTGCCCTACGGTTGCAGGATGAATGGGGACA2610.170686407868578No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC2590.1693784660458303No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG2580.16872449513445642No Hit
CATAGACAATTTCAGTGCGGCCGATGGGTCCCAAAGTAGGCAATTCTATG2510.1641466987548394No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA2490.16283875693209166No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCTTGTCTCTCCCTCTCTCACACA2470.16153081510934394No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT2440.15956890237522234No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAACCATGTCGTCAGGCGTGT2400.1569530187297269No Hit
CATAGAACTAGTTCCAGCACCACCAGTACGGTTGCAGGATGAATGGGGAC2360.15433713508423147No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTTGCAGGATGAATG2340.15302919326148373No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTAAGGCAGCTCCTCTTCTCTTC2310.15106728052736215No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCATAGATGTGGTTGCATGGGGGT2300.15041330961598828No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC2220.1451815423249974No Hit
CATAGAACATCTCCCTGTTCCTCCCAGATCTATGTGTAGAACCATGTCGT2180.14256565867950194No Hit
CATAGACTCAGAACTGGCTCTAATTCCTCTGCTTTTACAAACTCAAGTGA2170.14191168776812807No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC2080.1360259495657633No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGACACTTGAAAGCTCCCTGG2080.1360259495657633No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT1990.13014021136339857No Hit
CATAGACTCAGAACTGGCTCTAATTCCTACACTGCTCACGATGGTATTAC1980.1294862404520247No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAACTAGGCTATCTTCTGCTG1980.1294862404520247No Hit
CATAGAACTGACCATACACTTGCCCTGAACTTTCCCACCGCCCTTTTCTA1960.12817829862927696No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTAGAATCTTGAACTCAGG1950.12752432771790312No Hit
CATAGATGAGGGATGTAGGCTGTACACACATGTACACGGCAGGACTGTCT1880.12294653133828608No Hit
CATAGAGGCCATTCTTCTCATGCTGGTACGGTTGCAGGATGAATGGGGAC1800.11771476404729517No Hit
CATAGAACTCTTACCCTTTTGCCAGGGAACAGAGTGGGAGTCATTCATGA1800.11771476404729517No Hit
CATAGACACTTGACCATGCCCTTGTTGATTTAGGAAGCAGGGTTCTATGT1740.11379093857905201No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT1680.10986711311080882No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG1660.1085591712880611No Hit
CATAGAAGGGGTGATGCTCTGATGGAAGTGCACAGTTTGGAATGACTCTA1660.1085591712880611No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGCAATTCTATGTGTAGAACCATGT1650.10790520037668724No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTATAGATGTGGTTGCATGGG1640.10725122946531337No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG1630.10659725855393953No Hit
CATAGAACTGACCATACACTTGCCCTACGGTAGGTGGCTTCTGGTGCATC1610.10528931673119181No Hit
CATAGACTGGCTATTGTTTGGTTTGTACATACGGTTGCAGGATGAATGGG1600.10463534581981794No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA1600.10463534581981794No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT1600.10463534581981794No Hit
CATAGACCAGGACAATCACAGGGCACAGTTAGGCTACTTGGGGGTCTCTA1590.10398137490844406No Hit
CATAGAACTCTTACCCTTTTGCCAGGAGTTGACAAACGACAGCTTCTATG1580.10332740399707022No Hit
CATAGAAAAGTGTATTATGGGCCCAGGTCGTCAGTGTAAACCTGTGTGTG1530.1000575494402009No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTGACAGGGGTGTGGT1530.1000575494402009No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)