FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807466

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807466
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences274273
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA9177133.45972808114543No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCA195667.133768179879171No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCCCGCCAC72712.65100830194733No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA62522.279480663426586No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGAAAG42311.542623590364345No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTTGTATATCT33681.2279735883590437No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA32831.196982568462809No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA30841.1244271218822122No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT30691.118958118371112No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA28141.0259850586824077No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG26410.962909218187718No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA26340.9603570165492046No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT26190.9548880130381043No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTCTACT18730.6828962384193851No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT17650.6435194131394633No Hit
CATAGAAAGGCCTTCCTGTATCAGTCACCCTGCTTATCAAACATCTCTAT17400.6344044072876295No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG17140.6249248012017223No Hit
CATAGAGGTGAGCGGCTGTCTCCATCTATGAGGCCATGCTGAAGTCCCAT14130.515180130745644No Hit
CATAGATGACTTGGGGGAAAATGGTAGAAGTTTCTCTCTATCTGATTTCT13220.48200150944496906No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCTGCCAC10300.3755382410955508No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGGTCAGGAGATTGAGACCATCCTG9630.3511100254126363No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCCAC8920.3252234087934285No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCCTGCTAT8690.3168376034097414No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA7240.2639705694691056No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACGACAGCCCGGCTACTG7240.2639705694691056No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAGGTTTGTCAAAGATCA7050.25704316502171193No Hit
CATAGACATGCTAACATTTCTGGGGATACTGGGGACTGTGACTCTGTTTT6870.25048036080839164No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGCACCAC6870.25048036080839164No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA6550.23881315331804442No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG6380.23261494933879745No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGTTTTTCTCAGGTTTGTCAAA6380.23261494933879745No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTGCAGGCGCATGCTTG6300.22969814746621064No Hit
CATAGAGGTGAGCGGCTGTCTCCACTAAAAATACAAAAATTAGCCAGGCA5860.21365573716698327No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA5840.21292653669883654No Hit
CATAGAATTCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCA5580.20344693061292943No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTGCCAC5520.20125932920848935No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACGTGCCAC5240.19105052265443553No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGAGATTATAGGTACTAATTTT5170.1884983210159221No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAAATTTGTTAAAAGAGG5060.18448771844111522No Hit
CATAGACCATCCAGAGGTAATTCTGCTCATTATTATTGGATGGGATCTAT4980.18157091656852842No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA4880.17792491422779494No Hit
CATAGACATGCTAACATTTCTGGGGATTGTGACTGGGGACTGTGACTCTG4670.1702683093122546No Hit
CATAGATATGCCCATGGTTAGGAAGGCCATGCTGAAGTCCCATGATCTAT4630.1688099083759612No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT4460.16261170439671424No Hit
CATAGAGCAGAAAACCTTTGAATAACAGACTCATAGAGCAGGAATTAGAC4400.1604241029922741No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTGCAGGTGTGTGCCAC4320.15750730111968733No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCACCAC4250.15495509948117386No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTTCCACATGATGGACATCTA4240.15459049924710053No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA4210.15349669854488046No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCGCCAC4170.15203829760858706No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGTACCACAGGCATGTGCCAC4080.14875689550192692No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA4060.14802769503378022No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA4000.1458400936293401No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGCGCCAC3980.1451108931611934No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCTGCCAC3910.14255869152267997No Hit
CATAGACATGCTAACATTTCTGGGGATTGTGACTCTGTTTTCTATGTGTA3900.1421940912886066No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCAC3870.14110029058638657No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA3840.1400064898841665No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT3750.13672508777750636No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA3720.1356312870752863No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG3430.12505788028715914No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA3390.12359947935086575No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCAC3370.12287027888271904No Hit
CATAGACCAGACTTTTGAAAGAAGCACATGGAAGTACACAAAAAGGGCAT3320.12104727771235228No Hit
CATAGATTGCATAGCCATGTGTAGCCAGATGATATGAACCCAAAGGTCTA3210.11703667513754544No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCCGCCAC3120.11375527303088528No Hit
CATAGAGGTGAGCGGCTGTCTCCATCACTTATACGCCTCCCTGTCTATGT3060.11156767162644518No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA3040.11083847115829848No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTCTATGGCCATGCTGAAGTCCC3010.10974467045607843No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCATGTGCCAC3000.10938007022200508No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGTGCACCAT2920.10646326834941827No Hit
CATAGACCATCCAGAGGTAATTCTGCTACCGTAGCCATGCTGAAGTCCCA2890.10536946764719823No Hit
CATAGAGGTGAGCGGCTGTCTCCACTAAAAATACAAAAAATTAGCCAGGC2880.10500486741312487No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCATGCCAC2800.10208806554053808No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTTA2780.10135886507239138No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)