FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807470

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807470
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70273
Sequences flagged as poor quality0
Sequence length150
%GC39

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1336319.015838230899494No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT41475.901270758328234No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG36195.149915330212172No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA24013.4166749676262578No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG22953.2658346733453816No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA22333.177607331407511No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA15192.1615698774778367No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT14182.0178446914177566No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA14182.0178446914177566No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG10371.4756734449930984No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC9421.3404863887979737No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA9161.3034878260498342No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA8981.2778734364549686No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT6920.9847309777581716No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA6920.9847309777581716No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT6760.9619626314516244No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT6450.9178489604826889No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT6190.8808503977345495No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT5530.7869309692200418No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT5360.7627396012693353No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT5300.75420147140438No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT5280.7513554281160616No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT5010.712933843723763No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG4780.6802043459081013No Hit
CATAGACCACACACACAACTGAGAGTGTCTCATAGACCTTTTTCTGTAGT4760.6773583026197828No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA4450.6332446316508474No Hit
CATAGAACCAACCTCTCTATCTCCGTACATAGGGCACTGAGACCACATCT4370.6218604584975738No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT4020.5720547009520014No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC3790.5393252031363397No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATCTGTTTACTCGGAGATTTG3650.5194029001181109No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTACTAACCTCCCACCCCAGCTG3350.47671225079333457No Hit
CATAGAGGCACGATCTTGTTTCACTGTACACTGTCTTCAGCTCTTTGAGG3340.4752892291491753No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG3080.438290666401036No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT3000.4269064932477623No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGAGAAGTGTATTAATTA2940.41836836338280703No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGCCCCAGGTAGCAAAACAG2770.39417699543210055No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT2760.3927539737879413No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCGTCAGTGTCAGGGCAGAG2760.3927539737879413No Hit
CATAGACACACTGACAATTTGCACCTGGGTAGAGAGTTCTGTAGATGTTC2660.37852375734634924No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG2650.37710073570219No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT2600.36998562748139396No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC2530.36002447597227955No Hit
CATAGATATTCTGCCCCCTCCTCTCCACACTGAAGCAGAGGTAGATGGAT2490.3543323893956427No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTCGATAGCGAGAAGAGTGGAGGCT2430.34579425953068743No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT2410.34294821624236904No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT2410.34294821624236904No Hit
CATAGACACACTGACAATTTGCACCTGTGAGACAGGAGGAGCTGACTTAC2400.34152519459820985No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCACTTACTAACAAAGCGCTTCCT2230.3173338266475033No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTACGGCAACATATCAGAAGCAT2200.3130647617150257No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT2150.30594965349422965No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGCAACATATCAGAAGCATCT2140.30452663185007045No Hit
CATAGACCACACACACAACTGAGAGGAGAATGATATTGTTGCAGATTTCT2120.301680588561752No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC1990.28318130718768236No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT1910.2717971340344087No Hit
CATAGAGGCACAGGGATAATGAGGGAGTGTGGGAAAGGTATGTGGCACAT1860.26468202581361266No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA1820.2589899392369758No Hit
CATAGAAACAGCAAAGCCCTCCACCAAGTCAGCTTACACTGCACATGGGG1820.2589899392369758No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGCAGGGCAGAGAGTGTGTTGT1780.253297852660339No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA1750.24902878772786133No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA1730.2461827444395429No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1670.23764461457458766No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGGTCTCATAGAGGAGAATGATATT1630.23195252799795085No Hit
CATAGAAGTACCATCAGAGTGAACAGGTCACTGACAGGTCTTAAAGCTCT1590.226260441421314No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC1580.22483741977715482No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGCAGAGAGTGTGTTGTATT1580.22483741977715482No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTAGCCAAATTCCTTACCGATCTA1570.22341439813299563No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1480.21060720333556274No Hit
CATAGATATTCTGCCCCCTCCTCTCCGATAGCGAGAAGAGTGGAGGCTCT1420.20206907347060749No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1420.20206907347060749No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGGCATTCTCTCAGGGCT1380.19637698689397065No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC1380.19637698689397065No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACACGGCAACATATCAGAAGCATC1320.1878388570290154No Hit
CATAGAGGCACAGGGATAATGAGGGAGACTAACCTCCCACCCCAGCTGTC1310.1864158353848562No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGCAGCATTCTCTCAGGGCTGTTCT1280.1821467704523786No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA1280.1821467704523786No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGAGGAGAATGATATTGTT1280.1821467704523786No Hit
CATAGAAACAGCAAAGCCCTCCACCAGACCTTTTTCTGTAGTCAAGTGAT1280.1821467704523786No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAAGTGTATTAATT1190.1693395756549457No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAAACATTGGAAAGATGGGGA1150.16364748907830887No Hit
CATAGATACCTGTCCTCTGCCTCGAGGCGGAAGACACAGCACACTCTTCT1140.16222446743414967No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG1120.15937842414583125No Hit
CATAGAGCAGCATTTCTCTCCAAGGATGGTCTCATAGAGCAGCATTCTCT1110.15795540250167203No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA1110.15795540250167203No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1080.15368633756919442No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTACGTGCAATATGGGCTGGGTGAT1040.14799425099255759No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATATCAGACGGCAACATATCAG1010.14372518606007997No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGGAATCTTTGGGA970.13803309948344314No Hit
CATAGAAACAGCAAAGCCCTCCACCATAGAGGAGAATGATATTGTTGCAG930.13234101290680633No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACAATGCCTCACACACAGGTCTAT920.1309179912626471No Hit
CATAGATGGGATTATAGGTGTGAGCCACAGCGCCTGGCCAAAAATTTCCA920.1309179912626471No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC890.1266489263301695No Hit
CATAGACCATCCCTTCTACAAGAGGCACGATCTTGCTCCTTCTCACACAA850.12095683975353265No Hit
CATAGATGGGATTATAGGTGTGAGCCATTGCGCCTGGCCAAAAATTTCCA840.11953381810937344No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAATATGGGCTGGGTGATCTATGTG830.11811079646521423No Hit
CATAGAGTCCTTCCCTCTCACACATGTGAGTCCTTCCACTACCCACCTGC820.11668777482105504No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAACTTATCTGGGCACGGTG810.11526475317689582No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA800.1138417315327366No Hit
CATAGAAGTACCATCAGAGTGAACAGGCCATGCTGAAGTCCCATGATCTA800.1138417315327366No Hit
CATAGATGGGATTATAGGTGTGAGCCACTACGCCTGGCCAAAAATTTCCA790.11241870988857741No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTAATTAGGCGGGGAAAAGGGAT790.11241870988857741No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA780.1109956882444182No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAACTACAAAACTTATCTGGGCA780.1109956882444182No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGGTAGCAGAGACCTT740.10530360166778137No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA740.10530360166778137No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAACCTTCAGGTCA720.10245755837946297No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)