FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807471

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807471
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13521
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG742054.87759781081281No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA3922.899193846608979No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC2201.6270985873825898No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC1911.412617409954885No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT1411.0428222764588417No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT1381.0206345684490792No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG1110.8209451963612159No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC1050.7765697803416907No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC1050.7765697803416907No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTCAGTGTAGAATTAGCGGA680.5029213815546187No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT550.40677464684564746No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA540.39937874417572666No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA540.39937874417572666No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA510.37719103616596406No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT500.3697951334960432No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC450.33281562014643884No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC440.325419717476518No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTGGGT430.31802381480659714No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT420.3106279121366763No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG410.3032320094667554No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG400.29583610679683453No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG360.2662524961171511No Hit
CATAGACCCTTAGAGTTTCAGCCTCCCTCATAGAAAGGGACCATGCTCAC350.2588565934472302No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTCTCCCTTGTGCTCATACAGAATT350.2588565934472302No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG350.2588565934472302No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG340.25146069077730937No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGCTGGGAGAGGCTGTT340.25146069077730937No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT330.24406478810738852No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG330.24406478810738852No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG320.23666888543746764No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG310.2292729827675468No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG310.2292729827675468No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG280.20708527475778418No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT280.20708527475778418No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG270.19968937208786333No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG270.19968937208786333No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG270.19968937208786333No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTTCTACACATAGAACCCAAAGAGT260.19229346941794245No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG260.19229346941794245No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT260.19229346941794245No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGTGAGAAATGATGATGGC250.1848975667480216No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTATGTGGCCGCTAAGCCGAGA230.17010576140817987No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGTAGATTTGGACCTGCG220.162709858738259No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA220.162709858738259No Hit
CATAGAACAAGGCCAGAATTACCCTGGGCAACAGAACAACAACATCTATG220.162709858738259No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG220.162709858738259No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACGACATGGTTCTACACATAGAAC220.162709858738259No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGATCTGAGCAAGGATAGCC210.15531395606833814No Hit
CATAGAGAAGAGAAGGCGACAATGGCTAACCAGGGGGAAGAGAAGGGAGA210.15531395606833814No Hit
CATAGATTCTCCCTTGTGCTTTTGGTCATAGAGAATTAGCGGAGAGTGAG210.15531395606833814No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGTTTTGGACCTGCG210.15531395606833814No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGGTTGCAGATTTGGACCTGCG210.15531395606833814No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCATGGTTCTACACATAGAACCCAA200.14791805339841727No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGATCTGCG200.14791805339841727No Hit
CATAGAACAATGTAATAAGCATCGGAGGAGGCCTGAGATTGCTGCTATCT200.14791805339841727No Hit
CATAGAGAAGAGAAGGCGACAATGGCCGCTAAGCCGAGAAGATCTCTATG190.14052215072849641No Hit
CATAGACAGGAGGAGGAAGAAGAGGAAGACAAGGAGGAGGAGGAGGAGGA190.14052215072849641No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCTGACGACATGGTTCTACACATAG190.14052215072849641No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGGGACATGGATGAAGC180.13312624805857556No Hit
CATAGATCTGTGGCTCCCGATAAATGTGATCTGAGCAAGGATAGCCCTCT180.13312624805857556No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC170.12573034538865469No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG170.12573034538865469No Hit
TAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCGAG160.11833444271873382No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT160.11833444271873382No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACACTGACGACATGGTTCTA160.11833444271873382No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT160.11833444271873382No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCGCCGTGAGTTCTGAGGCCAAGAA160.11833444271873382No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGTACCTGCG160.11833444271873382No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTTCTAC160.11833444271873382No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTTTGCAGATTTGGACCTGCG150.11093854004881294No Hit
TATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG150.11093854004881294No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA150.11093854004881294No Hit
CATAGATCATGGGGCTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG140.10354263737889209No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC140.10354263737889209No Hit
CATAGAACAATGTAATAAGCATCGGAGGACACTGACGACATGGTTCTACA140.10354263737889209No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTAGAATTAGCGGAGAGTG140.10354263737889209No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCGACATGGTTCTACACATAGAACC140.10354263737889209No Hit
CATAGATCATGGGATTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG140.10354263737889209No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC140.10354263737889209No Hit
CATAGAGAAGAGAAGGCGACAATGGCTTGAACCCGGGAGGAGGTTGCAGC140.10354263737889209No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)