FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807472

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807472
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13521
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA689450.98735300643443No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT3952.9213815546187414No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG3202.3666888543746762No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG2681.9821019155387916No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG1921.420013312624806No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1901.405221507284964No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA1200.8875083203905035No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG1180.872716515050662No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG1080.7987574883514533No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTACACTGACTATGGCTTAATGTT560.41417054951556836No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT540.39937874417572666No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA530.39198284150580576No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT530.39198284150580576No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT520.3845869388358849No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA470.3476074254862806No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA460.34021152281635975No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT450.33281562014643884No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA440.325419717476518No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG420.3106279121366763No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC410.3032320094667554No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG390.2884402041269137No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA390.2884402041269137No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG390.2884402041269137No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAAGCTTTGAGAT390.2884402041269137No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA360.2662524961171511No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAGGTAAACAAAC350.2588565934472302No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT330.24406478810738852No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA330.24406478810738852No Hit
CATAGATCTCAAACAGCCTCTCCCAGCATAGAGAAGCTTTGAGATTTGTG330.24406478810738852No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG320.23666888543746764No Hit
CATAGATCAAGGTGTGAGCATGGTCCCTTTCTATGAGGGAGGCTGAAACT300.22187708009762588No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT290.21448117742770503No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG280.20708527475778418No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA270.19968937208786333No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT260.19229346941794245No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACTGCT250.1848975667480216No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA240.17750166407810075No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA240.17750166407810075No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA230.17010576140817987No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTCTATGACCAAAAGCACAAGGGA220.162709858738259No Hit
CATAGAACCAACCCTGATTCTGCTGGTCTCCCTGATGTAAATCCCTTTAC220.162709858738259No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGGTAATTCTGGCCTTGTTCTATG220.162709858738259No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCACATAGAAGCTTTGAGATTTGTG220.162709858738259No Hit
CATAGAGCCATCATCATTTCTCACCCAGAAGCTTTGAGATTTGTGTCTGT210.15531395606833814No Hit
CATAGATCCAGCTTCATCCATGTCCCTGCAAAGGACATGAACTCATCCTT210.15531395606833814No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTGAGGTTTCCTGGGCATCAA200.14791805339841727No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG190.14052215072849641No Hit
CATAGAGGTGAGCGGCTGCCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA190.14052215072849641No Hit
CATAGATAGCAGCAATCTCAGGCCTCCTCCGATGCTTATTACATTGTTCT190.14052215072849641No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCACAGAGCCTTCAGGTCA190.14052215072849641No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA190.14052215072849641No Hit
CATAGATAGCAGCAATCTCAGGCCTCTCTTCCCTCCTCTCCTCGTCTTCT190.14052215072849641No Hit
CATAGAGGTGAGCGGCTGTCCCCACAAGTCCGCGCAGAGCCTTCAGGTCA190.14052215072849641No Hit
CATAGATAGCAGCAATCTCAGGCCTCTGCACCACTGCCCCACATCTCCTC190.14052215072849641No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCTGAGCCTTCAGGTCA180.13312624805857556No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA180.13312624805857556No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG180.13312624805857556No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTAACCTGTGTATATTCTCCT170.12573034538865469No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA170.12573034538865469No Hit
CATAGAGGGCTATCCTTGCTCAGATCACATTTATCGGGAGCCACAGATCT170.12573034538865469No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA170.12573034538865469No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA170.12573034538865469No Hit
CATAGAGATCTTCTCGGCTTAGCGGCTGTCTCCACAAGTCCGCGCAGAGC170.12573034538865469No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAACCTTCAGGTCA170.12573034538865469No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC160.11833444271873382No Hit
TATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA160.11833444271873382No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT150.11093854004881294No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCTTTCAGGTCA150.11093854004881294No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCATGACCTTAGC150.11093854004881294No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGCTGCTGCTCACT140.10354263737889209No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAGGCTTCTCAAGTGGAGAAGGT140.10354263737889209No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)