FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807473

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807473
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences106729
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4661143.672291504651966No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC20931.9610415163638748No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC19181.7970748343936513No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT15741.4747631852636116No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT14971.4026178451967133No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA14391.348274602029439No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA13091.2264707811372728No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC13001.2180382089216613No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA11221.0512606695462339No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA11191.04844981214103No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA10410.9753675196057304No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA9430.8835461777024052No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG9320.8732397005499911No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA7890.7392554975686083No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG6870.643686345791678No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA6400.5996495797768179No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA6320.5921539600296076No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA6020.5640453859775694No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT5410.5068912854050914No Hit
CATAGATCATGGGACTTCAGCATGGCACGGTTGCACAGATCATTTAAGCT5170.48440442616346074No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT4320.4047634663493521No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT4050.3794657497025176No Hit
CATAGATCATGGGACTTCAGCATGGCCATGGAGACAGCCGCTCACCTCTA3720.34854631824527543No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACTGATACAGGAAGGCC3360.31481602938282943No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGAGACAGCCG3300.30919431457242175No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTGGAGACAGCCGCTCACCTCT2970.27827488311517956No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG2960.2773379306467783No Hit
CATAGACAGGGAGGCGTATAAGTGATGACTGATACAGGAAGGCCTTTCTA2960.2773379306467783No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG2790.26140973868395656No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT2760.25859888127875275No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG2760.25859888127875275No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACAGCCGC2730.25578802387354893No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2700.25297716646834506No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG2660.24922935659473996No Hit
CATAGATGCCCTTTTTGTGTACTTCCATCCTTTCCCTCACTCTCTCCATC2590.24267068931593103No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG2530.2370489745055233No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG2490.23330116463191822No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCTTGACTCCACTAAAAATA2480.23236421216351694No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG2280.21362516279549137No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG2150.20144478070627478No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCCATCTCTA2090.19582306589586712No Hit
CATAGATCATGGGACTTCAGCATGGCAATCCTTTCCCTCACTCTCTCCAT1950.18270573133824922No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA1820.1705253492490326No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC1820.1705253492490326No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA1810.1695883967806313No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1590.1489754424758032No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTGGAGA1570.14710153753900063No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTAGAGA1540.1442906801337968No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1500.1405428702601917No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT1490.13960591779179043No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1480.13866896532338915No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1410.1321102980445802No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATGGAGACAGCCGCTCACCTCT1390.13023639310777765No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA1320.1236777258289687No Hit
CATAGACAGAAACCACCCAGACAACCACACTGACGACATGGTTCTACACT1310.12274077336056743No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCTGATTGGCCATTTGAACT1290.12086686842376487No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA1250.11711905855015974No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1220.1143082011449559No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACTCCATCTCTA1200.11243429620815336No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA1200.11243429620815336No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTGGAGACAGCCG1160.10868648633454825No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA1160.10868648633454825No Hit
CATAGATCATGGGACTTCAGCATGGCGAAACCCCATCTCTACTAAAAATA1160.10868648633454825No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGATCTGCG1150.10774953386614697No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTTTGCAGATTTGGACCTGCG1150.10774953386614697No Hit
CATAGATGTCCATCATGTGGAAGCTGGAGACAGCCGCTCACCTCTATGAG1120.10493867646094314No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCCGTCTCTA1110.10400172399254186No Hit
CTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCTACCGTACCA1080.10119086658733803No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)