FastQCFastQC Report
Wed 8 May 2024
EGAF00005807477

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807477
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences211015
Total Bases31.6 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG6205729.408809800251166No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG113205.364547544013458No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG85994.075065753619411No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA66303.1419567329336777No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC59692.8287088595597467No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG52372.4818140890458027No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC44522.1098026206667773No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA41211.9529417339999526No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA36911.749164751320996No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG36601.7344738525697223No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT29201.38378788237803No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG26391.2506219936971306No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA25141.1913844987323177No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC16570.7852522332535602No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA15370.7283842380873398No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC13030.61749164751321No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA12060.5715233514205151No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT11530.5464066535554345No Hit
CATAGACCCTTCTCCATGCCACATCATCCCATGGGTCCTTTTCACATCAT10720.5080207568182357No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT10200.4833779589128735No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGAGCAGAGTTGGGTGTGTC10130.480060659194844No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTGGCTAGTCCGTCACCCCTAAT9920.4701087600407554No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT9500.4502049617325783No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA9180.43504016302158616No Hit
CATAGAGGGGCATGCTGGATAAATCTATGAGACCAGCATGTTGAGATGAA9120.4321967632632751No Hit
CATAGACCCTTCTCCATGCCACATCAGTGTCCATGGGTCCTTTTCACATC9040.4284055635855271No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA8900.421770964149468No Hit
CATAGAAGATGGTCTGCTACACTGGTCATAGAGCCATGGGTCCTTTTCAC8830.4184536644314385No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCAGGGATTATCAGTAGTGCTCA8230.39001966684832834No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGAGGGAAGGAAGGGCAAACT8020.3800677676942398No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC7880.3734331682581807No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG7620.36111176930549965No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC7600.3601639693860626No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCGGAGGGAAGGAAGGGCAAAC7590.35969006942634413No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCAGCCATGGGTCCTTTTCACATCAT7370.34926427031253704No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT6920.3279387721252044No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA6600.31277397341421226No Hit
CATAGAAGATCCCATAGCAGCTTTGCCATGTCTTCTGTGTTTGGTCTATG6390.3028220742601237No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG6040.28623557566997604No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA5950.2819704760325096No Hit
CATAGACCCTTCTCCATGCCACATCAGTGCAGCTATATTGGAGGAAAAGT5850.2772314764353245No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT5780.27391417671729495No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTTCTTATAGCCAGTGTCTCCC5620.2663317773617989No Hit
CATAGACACCTGGATCCTGTGTTGTCTCATTTCCCCTCTCTCTGAATAAC5440.2578015780868659No Hit
CATAGATCATGCAAAGAACACAGGCCCATGGGTCCTTTTCACATCATCTA5290.2506930786910883No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTAAGTGCAGCTATATTGGAG5110.24216287941615525No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAGTGCAGCTATATTGGAGGA5020.23789777977868873No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG4930.23363268014122218No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA4920.23315878018150366No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT4360.20662038243726752No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGGGAGGGAAGGAAGGGC4300.20377698267895647No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTTCTTATA4120.1952467834040234No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGCGCGGTGGCTCATGCCTGTAAT4120.1952467834040234No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA4070.19287728360543088No Hit
CATAGAACTTTGTGCCCCCAGTGTCTGCTACCGTAAGTTTTTCCAAATAT4060.19240338364571238No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTTCTTATAGCCAGTGTCTCCCCT4010.1900338838471199No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTACCACAGAG3950.18719048408880884No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGACGGAGTGAGGGCAGTAA3790.1796080847333128No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG3670.17392128521669076No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGAGTTTTTCCAAATATAAGATCC3670.17392128521669076No Hit
CATAGATCATGGGACTTCAGCATGGCATGTTGAGATGAATAATTGAGACT3420.16207378622372817No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA3300.15638698670710613No Hit
CATAGATCATGCAAAGAACACAGGCCAGGCTCAATGGAGAAGGTTTGCTG3240.1535435869487951No Hit
CATAGATGTGGCTATGCAGACTGAGTCAGGAAAGCAATCACCGCCAGTCT3140.14880458735161006No Hit
CATAGACCCTTCTCCATGCCACATCAGGGATTATCAGTAGTGCTCACATC3070.14548728763358054No Hit
CATAGATGTGCCTCTCCAACATTCATCTGGTTCTATGTGTAGCCACACTC2990.14169608795583252No Hit
CATAGATCAACAATGGATGAGCAAAAGGCATAGATCAACAAGGGATTATC2990.14169608795583252No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAAATTTGGACCTGCG2900.13743098831836598No Hit
CATAGAGAGGTCGCCCAGGTATTTCTCGCTCTCTCCAGAACCCACCATCT2890.13695708835864748No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTTTTTCCAAATATAAGATCCCA2820.13363978864061796No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG2690.12747908916427741No Hit
CATAGAAGATGGTCTGCTACACTGGTCTGGAGACAGCCGCTCACCTCTAT2670.12653128924484042No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGAGAAGTAAGGTGACTCTCCCCAG2650.12558348932540342No Hit
CATAGATGTGGCTATGCAGACTGAGTCCTGGCATATACAAGGTGTCTATG2610.1236878894865294No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGACGCCGTGGCTCACACCTGTAAT2420.11468379025187782No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCTTCTTATAGCCAGTGTCTCCCC2380.11278819041300381No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGCTAGTC2380.11278819041300381No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG2380.11278819041300381No Hit
CATAGATGTGGCTATGCAGACTGAGTGGGGGCAGATTAACAGGTCATCTA2370.11231429045328531No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGAAGGGAGGGAAGGAAGGGCAAA2300.1089969907352558No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCA2260.10710139089638178No Hit
CATAGACTCAAGCAATCCTCCCACCTACACTGACGACATGGTTCTACACA2230.10567969101722627No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG2200.10425799113807076No Hit
CATAGACCCTTCTCCATGCCACATCATGCAAAGCTGGTCTATGAGACCAA2150.10188849133947823No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG2140.10141459137975974No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)