FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807480

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807480
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105686
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG91038.613250572450466No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG71056.722744734401907No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT57895.47754669492648No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT51394.862517268133907No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC44704.229510058096626No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG38863.676929773101451No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT34233.23883958140151No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCCGGATTCAAGCAATTCTTCTAT28552.7013984822966144No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG27972.6465189334443537No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT27522.6039399731279453No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG23322.2065363435081276No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA20991.9860719489809435No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG12611.1931570879775941No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA12101.1449009329523303No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA12001.1354389417709063No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC9990.9452529190242795No Hit
CAGTTTCCCCTCCTTCTATGTGTAGAACCATGTCGTCAGTGTAGATCTCG8360.7910224627670647No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT8270.782506670703783No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCCATGCTGAAGTCCCATGAT8090.7654750865772193No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG7990.7560130953957951No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA7780.7361429139148042No Hit
CATAGAAAGGCAATGTTCAAGTGGTTTTGAGGTAAAACTATTAGCGAGAC7740.7323581174422346No Hit
CATAGACCTGACCTCATGATCTGCCTTCAGAACGCGGCAAATGGTCTATG7380.6982949491891074No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA7190.6803171659444014No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTCTTGGCCTCAGTTTCCCC7000.6623393826996954No Hit
CATAGACCAGCTTTGCATGATGTGGCATGGAGAAGGGTCTATGTGTAGAA6820.6453077985731317No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTGGCATGGAGAAGGGTC6500.6150294267925742No Hit
CATAGATGATGTGAAAAGGACCCATGGGATGATGTGGCATGGAGAAGGGT6000.5677194708854532No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGATCTATGTGTAGAACCATGCT5860.5544726832314593No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC5770.5459568911681774No Hit
CATAGATTAGGGGTGACGGACTAGCCTTTTGCTCATCCATTGTTGATCTA5650.5346025017504683No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG5570.527032908805329No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT5500.520409514978332No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGACTCTA5460.5166247185057623No Hit
CATAGACCAGCTTTGCATGAGTGTGGGACTTGGTCTCATAGACCAGCTTT5350.5062165282061958No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTAGAGACTTGGCCTCAGTT5140.4863463467252049No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGATCTTCAGAACGCGGCAAATG4610.43619779346365645No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA4600.4352515943455141No Hit
CATAGATGATGTGAAAAGGACCCATGGCGTCAGTGTACCTAGTGATTACC4550.4305205987548019No Hit
CATAGAAAGGCAATGTTCAAGTGGTTTTTGGCCTCAGTTTCCCCTCCTTC4540.42957439963665955No Hit
CATAGATGTGAGCACTACTGATAATCCCTAGAGACTTGGCCTCAGTTTCC4310.4078118199193838No Hit
CATAGAGGCTGGGTGACTTGGTGAATGTTGGAGAGGCACATCTATGTGTA4170.39456503226538997No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGGTGGGAGGAT4080.3860492402021081No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG3900.36901765607554454No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCTATGTGTAGAACCATGTCGTC3890.3680714569574021No Hit
CATAGACTGGCGGTGATTGCTTTCCTGATGTTTTAAAATGAGCACCTAAC3800.35955566489412033No Hit
CATAGATGTGAGCACTACTGATAATCCCTGAGACTTGGCCTCAGTTTCCC3470.32833109399542043No Hit
CATAGAACTTGCTCTCAAACTTCAGGGTGCTCAGGTGGGAGGATTGCTTG3210.3037299169237174No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAGAGGCACATCTATGTGTAGAAC3020.2857521336790114No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA2910.2753439433794448No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG2770.2620971557254509No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG2670.2526351645440266No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA2660.25168896542588426No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGAGACACTGGGGGCACAAAG2640.24979656718959936No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTTTGGCCTCAGTTTCCCCT2450.2318187839448934No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCTGGCCTCAGTTTCCCCTCCTT2420.2289801865904661No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC2350.22235679276346915No Hit
CATAGATACGATCATAAGGGTGGGGCCTGTGTTCTTTGCATGATCTATGT2340.22141059364532675No Hit
CATAGACCAGCTTTGCATGAGTGTGGGGAAGTAGGGAATGATTACAAGTT2240.2119486024639025No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACACTGGGGGCACAAAGTT2200.2081638059913328No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGATTGGTCTCATAGAGG2190.2072176068731904No Hit
CATAGAACTTGCTCTCAAACTTCAGGGTGCTCCTCTATGAGACCAGGGAA2120.20059421304619343No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTCAGTCTGCATAGCCACATCT2110.199648013928051No Hit
CATAGATGATGTGAAAAGGACCCATGGCCTCAGTTTCCCCTCCTTCTATG2060.1949170183373389No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTATGCTGAAGTCCCATGAT1940.18356262891962985No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGTCTCATAGAGGGGAGACACTG1770.16747724391120866No Hit
CATAGACACCTTGTATATGCCAGGACTCAGTCTGCATAGCCACATCTATG1740.1646386465567814No Hit
CATAGACCTGACCTCATGATCGGCCTGTGTTCTTTGCATGATCTATGTGT1700.1608538500842117No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAGGATTGCTTGAGTCTATGTGTA1700.1608538500842117No Hit
CATAGACTTACTGCCCTCACTCCGTCTACGGTAGCAAACACTCAAAACAG1690.1599076509660693No Hit
CATAGATACGATCATAAGGGTGGGGCCTTGGCCTCAGTTTCCCCTCCTTC1610.15233805802092992No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTACACTGATGTGGCATGGAGA1600.1513918589027875No Hit
CATAGACCAAACACAGAAGACATGGCACACTCCTCCCGGATTCAAGCAAT1590.15044565978464508No Hit
CATAGAACTTGCTCTCAAACTTCAGGGTGCTCCTCTATGAGAACCAGTGT1370.12962927918551181No Hit
CATAGATGACCTGTTAATCTGCCCCCACTCAGTCTGCATAGCCACATCTA1350.12773688094922694No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAAGCTGCTATGGGATCTT1340.12679068183108455No Hit
CATAGAACTTGCTCTCAAACTTCAGGGTGCACCAGTGTAGCAGACCATCT1330.12584448271294213No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTCAGTTTCCCCTCCTTCTATGT1300.12300588535851485No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAAGCTGCTATGGGATC1290.12205968624037242No Hit
CATAGACCAGCTTTGCATGAGTGTGGTACGGTAGCAGAGACTCAGTCTGC1220.11543629241337547No Hit
CATAGATGGTGGGTTCTGGAGAGAGGTGGGAGGATTGCTTGAGTCTATGT1200.11354389417709061No Hit
CATAGATTAGGGGTGACGGACTAGCCTAGCAGAGACTTGGCCTCAGTTTC1190.1125976950589482No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)