FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807487

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807487
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences208990
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG5699627.272118283171444No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG110875.305038518589407No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG81153.882960907220441No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA69823.3408297047705635No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC62682.999186563950428No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG49392.3632709699028664No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC45212.1632614000669887No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA40861.955117469735394No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA34271.6397913775778747No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG33751.6149098042968564No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA30651.4665773481984783No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT22731.0876118474568162No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT20730.991913488683669No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC17540.8392746064404994No Hit
CATAGACCCTTCTCCATGCCACATCAGGAAAGCAATCACCGCCAGTCTAT15740.7531460835446672No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGAGCATGTTGAGATGAATAATTG15630.7478826738121441No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA14540.695727068280779No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA14010.670367003205895No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAAGTTTTTCCAAATATAA13930.6665390688549692No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCATTTCCCCTCTCTCTGAATAACTC13800.6603186755347146No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG13050.6244317909947844No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC12340.5904588736303172No Hit
CATAGAAGATGGTCTGCTACACTGGTTCTCATAGGAAAGCAATCACCGCC11350.5430881860376094No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGAGGGAAGGAAGGGCAAACT11150.5335183501602948No Hit
CATAGATCACCTACACAGACAGCTTTCCTCATTACTCTGGTTCTATAGTT10160.48614766256758696No Hit
CATAGATCACCTACACAGACAGCTTTCCACATCCAACTAAACGCAGACAA9950.4760993348964065No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT9820.469878941576152No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC9620.46030910569883726No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA9310.4454758600889995No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA8650.41389540169386096No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTAGTGCAGCTATATTGGAGGAA8110.38805684482511127No Hit
CATAGACCCTTCTCCATGCCACATCAGGGATTATCAGTAGTGCTCACATC7950.3804009761232595No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTACACTGACGACATGGTTCTAC7630.36508923871955595No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA7400.35408392746064404No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGCTAGTCCGTCACCCCTAAT7390.3536054356667783No Hit
CATAGATCATGCAAAGAACACAGGCCCTATAGTTTTTCCAAATATAAGAT7040.3368582228814776No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT6770.32393894444710275No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC6600.3158045839513852No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGAGGGAAGGAAGGGCAAACTC6350.3038422891047418No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTCTTCAGCATGTTGAGATGAAT6300.30144983013541315No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA6270.30001435475381594No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGAGGGAAGGAAGGGCAAACTCT6260.2995358629599502No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGCTAGTCCGTCACCCCTAATC6220.2976218957844873No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG5720.2736973060912005No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA5630.2693908799464089No Hit
CATAGACCCTTCTCCATGCCACATCATCAGCATGTTGAGATGAATAATTG5410.25886406048136273No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGACGCCATGGGTCCTTTTC5280.2526436671611082No Hit
CATAGACCATTTGCCGCGTTCTGAAGGGTAGCAGAGTCCTGGCATATACA5140.24594478204698791No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG5040.24115986410833054No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAAGCAAGTCCTGGCATATACA4860.2325470118187473No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAAACCACTTGAACATTGCCTT4800.2296760610555529No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA4690.22441265132302982No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT4590.21962773338437247No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGACGCCGTGGCTCACACCTGTAAT4490.2148428154457151No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAAAACCACTTGAACATTGCC4400.2105363893009235No Hit
CATAGAAGGAGGGGAAACTGAGGCCATCTTAGGTAGAGGAGTTTCAAACA4380.209579405713192No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGCTAGTC4370.20910091391932628No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAGGAAAGCAATCACCGCCAG3830.18326235705057659No Hit
CATAGATGTGCCTCTCCAACATTCACCAAGTCACCCAGCCTCTATGAGAC3750.1794344226996507No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCTACCGTAGACGGAGTGAGGGCAGT3650.17464950476099333No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTTCTTATAGCCAGTGTCTCCC3230.15455284941863245No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG3200.15311737403703526No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG3160.15120340686157233No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCGGAGGGAAGGAAGGGCAAAC3090.14785396430451217No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG3030.14498301354131776No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGAGACAGCCGCTCACCTCTA3020.144504521747452No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG2890.13828412842719748No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTAAAGGTATG2840.1358916694578688No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG2820.13493468587013732No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCATCTATGAGACCAAGTCTC2760.13206373510694291No Hit
CATAGATCATGGGACTTCAGCATGGCTAGTCCGTCACCCCTAATCTATGA2720.13014976793147998No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCACACTGACGACATGGTTCTACACA2690.12871429254988279No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG2670.12775730896215132No Hit
CATAGATTCTCAGAGGTTCAATTTGGTTTTTGAGGAAAGCAATCACCGCC2660.12727881716828557No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTACGGTGTCAGAGATAGCACAGTG2620.12536484999282263No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTAGACCTCATTTCCCCTCTCTC2560.12249389922962821No Hit
CATAGATCATGGGACTTCAGCATGGCATGTTGAGATGAATAATTGAGACT2500.1196229484664338No Hit
CATAGATCTAGTACTGTAATTGTAGTGTGCAACACTGACGACATGGTTCT2470.11818747308483658No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTGGAGGGAAGGAAGGGCAAACT2450.11723048949710511No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCCGGAGGGAAGGAAGGGCAAA2450.11723048949710511No Hit
CATAGACTCAAGCAATCCTCCCACCTTGACGACATGGTTCTACACATAGA2440.1167519977032394No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA2420.11579501411550792No Hit
CATAGACCCTTCTCCATGCCACATCATTTCCCCTCTCTCTGAATAACTCT2340.11196707976458203No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT2320.11101009617685056No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT2220.10622517823819322No Hit
CATAGAACACAGATCTGCTTGGAGGTCAGGTAGGCAGATCATGAGGTCAG2130.1019187520934016No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)