FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807489

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807489
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103439
Sequences flagged as poor quality0
Sequence length150
%GC36

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA1127410.899177292897264No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT92648.956003054940593No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG58555.660340877231992No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA49344.769961039839905No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA44104.263382283278068No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG40013.867980162221212No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT34273.313063738048512No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAATTTGCAAATACAGAATCAGTGA29592.860623169210839No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATAGAACAGCTAAAAAT17931.7333887605255272No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA16241.570007444000812No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA15931.5400380900820774No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA15421.4907336691189976No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA13141.2703139048134648No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA12501.208441690271561No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT11911.1514032424907432No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG11811.141735708968571No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT9950.9619195854561625No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG9810.9483850385251211No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA9590.9271164647763416No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT8880.858476976768917No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCAGTGTAGAATTTGCAAATA7110.687361633426464No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT6760.6535252660988602No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGCTGAGATTGGCCTGTGTCT6750.6525585127466429No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC5910.571351231160394No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAACATTAGCTTAGTTAATTAGGGA5760.5568499308771353No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA5620.5433153839460939No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA5550.536548110480573No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT5430.5249470702539661No Hit
CATAGACCTGTGTGTGAGGCATTGTTCTGCTGAGATTGGCCTGTGTCTAT5200.5027117431529694No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCATAGAACAGCTAAAAA4620.44664004872436897No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCAAACTAACACAGAAACAGAAA4600.4447065420199344No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG4560.4408395286110655No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT3810.3683330271947718No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG3680.3557652336159476No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTTCACTCTGATGGTACTTCT3630.3509314668548613No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA3630.3509314668548613No Hit
CATAGATGCTTCTGATATGTTGCCGTAGAATTTGCAAATACAGAATCAGT3520.3402971799804716No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAATTTGCAAATACAGAATCAGTG3360.32482912634499556No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG3350.32386237299277837No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGGTGGGGAAAGAGAGCACTCTAT3150.3045273059484334No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG3130.3025937992439989No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTTACACATAGAACAGCTA3030.2929262657218264No Hit
CATAGACAGCTGGGGTGGGAGGTTAGTGTAGAATTTGCAAATACAGAATC3000.29002600566517467No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT2980.2880924989607402No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG2870.2774582120863504No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA2870.2774582120863504No Hit
CATAGAGCCTCCACTCTTCTCGCTATCCAGATCCTTGTCAACTCTTGGTC2620.2532893782809192No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGACCAAAGCTAGAAACTCCCATCT2530.24458859811096392No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT2530.24458859811096392No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGTTCACTCTGATGGTACTTCT2480.2397548313498777No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC2310.22332002436218448No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTGGGGAAAGAGAGCACT2260.21848625760109824No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTGGGGAAAGAGAGCACTCTAT2240.21655275089666376No Hit
CATAGACTCTGTTTTGCTACCTGGGGACATGTGTGAGAGGGAAGGACTCT2110.20398495731783953No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAAAGGAGGATCACTCTATGAG2090.20205145061340501No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTGTTACACATAGAACAGC2080.20108469726118774No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA2010.19431742379566702No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCCTTTCCTCAGTTCTTTTTCTAT1980.19141716373901527No Hit
CATAGAGGCATAGTATTGAAACTGTAGATCACAACTGGCATCTGGTGATC1920.18561664362571176No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA1910.18464989027349452No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGGAGACAGCCGCTCA1870.18078287686462552No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCTGGTCATTCTTCTCTGGGGGCT1860.17981612351240828No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT1790.17304885004688755No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGTGTGAGAGGGAAGGACTCTAT1790.17304885004688755No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGACCAAAGCTAGAAACTCCCAT1780.17208209669467028No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC1750.16918183663801853No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGGTGCAAATTGTCAGTGTGTCTA1730.16724832993358404No Hit
CATAGATGCTTCTGATATGTTGCCGTAGAACAGCTAAAAATCTTGGAGCT1720.1662815765813668No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT1720.1662815765813668No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAAGAACATTAGCTTAGTTAATTA1710.16531482322914953No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCCTCTTGTAGAAGGGATGGTCTA1710.16531482322914953No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGAGAGGAGGGGGCAGAATATCT1670.16144780982028056No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTTACGGAGATAGAGAGGTTGG1670.16144780982028056No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATCTCCCTCATTATCCCTGT1650.15951430311584605No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACGGACTACAAGTACCCA1640.1585475497636288No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG1630.15758079641141157No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATTTACTGACATGGGCAATTCG1600.1546805363547598No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGCAAACTAACACAGAAACAGAA1580.1527470296503253No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGATGCTCAGATCTCAAAAGGCT1580.1527470296503253No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGTCATTCTTCTCTGGGGGC1550.14984676959367357No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGGGTGGGGAAAGAGAGCACTCT1550.14984676959367357No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT1480.14307949612815282No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTACATGTGTGAGAGGGAAGGACTC1430.13824572936706658No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACGGAGATAGAGAGGTTGGTT1390.1343787159581976No Hit
CATAGAATACAACACACTCTCTGCCCTGCCTCTTGTAGAAGGGATGGTCT1380.13341196260598034No Hit
CATAGAACAGTAAGTCAGCTCCTCCTGTTCACTCTGATGGTACTTCTATG1330.12857819584489408No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTGTTCACTCTGATGGTACTTCT1310.1266446891404596No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTAATGGAGGAGTATGGGATC1290.12471118243602511No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC1270.1227776757315906No Hit
CATAGATGTGGTCTCAGTGCCCTATGGTGGAGGGCTTTGCTGTTTCTATG1250.1208441690271561No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA1250.1208441690271561No Hit
CATAGACCCCATGTGCAGTGTAAGCTACCGTAACATGTGTGAGAGGGAAG1210.1169771556182871No Hit
CATAGAGAACAGCCCTGAGAGAATGCACACTGACGACAGTGAAACAAGAT1200.11601040226606986No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC1200.11601040226606986No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCGAGGCAGAGGACAGGTATCT1190.1150436489138526No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA1190.1150436489138526No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACTGACGACATGTGTGAGAGGG1170.1131101422094181No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAACAGCTAAAAATCTTGGAGCTC1170.1131101422094181No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGACACTTTGGACTCTGCCTC1140.11020988215276638No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1120.10827637544833188No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG1100.10634286874389737No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGTCATTCTTCTCTGGGGGCTCT1090.10537611539168013No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGATTTACTGACATGGGCAAT1080.10440936203946287No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTGGGGAAAGAGAGCACTCTA1060.10247585533502837No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)