FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807490

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807490
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103439
Sequences flagged as poor quality0
Sequence length150
%GC34

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT1121910.846005858525315No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT90888.785854464950358No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA57395.548197488374791No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT48904.727423892342347No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA44044.2575817631647634No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG40063.8728139289822985No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT32993.189319308964704No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTTGCTCCTTCTCACACAAA29592.860623169210839No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGAAGTGTATTAATTATCT17661.7072864200156614No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA16011.5477721168998153No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA15861.5332708166165565No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA15351.483966395653477No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA13001.2567793578824233No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT12421.200707663453823No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT11701.131101422094181No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG11701.131101422094181No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT10050.9715871189783352No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA9720.9396842583551659No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG9530.921315944663038No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT8810.8517097033033962No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTACACTGAGGAGAATGATA7030.6796276066087259No Hit
CATAGACACAGGCCAATCTCAGCAGACCTTTTTCTGTAGTCAAGTGATCT6860.6631927996210327No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT6760.6535252660988602No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA5820.5626504509904388No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTGCTCCTTCTCACACA5690.5500826574116146No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT5530.5346146037761386No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT5400.5220468101973144No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT5370.5191465501406627No Hit
CATAGACACAGGCCAATCTCAGCAGAACAATGCCTCACACACAGGTCTAT5190.5017449898007521No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGAGAAGTGTATTAATTATC4620.44664004872436897No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGGCAACATATCAGAA4590.4437397886677172No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG4450.43020524173667574No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT3770.3644660137859028No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG3680.3557652336159476No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT3590.3470644534459923No Hit
CATAGAAGTACCATCAGAGTGAACAGGAATCTTTGGGAGGCTATTAGTCT3520.3402971799804716No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTACGGCAACATATCAGAAG3440.3325631531627336No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTCACTGAGCTGAGGGTCAC3380.3267626330494301No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC3350.32386237299277837No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC3120.30162704589178163No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCACTATTCTCTGGCCCGTCTAT3050.2948597724262609No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTACACTAACCTCCCACCCC3040.29389301907404364No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAAGAAGTGTATTAAT3010.2909927590173919No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC2930.2832587321996539No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA2850.27552470538191587No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG2780.2687574319163952No Hit
CATAGACCAAGAGTTGACAAGGATCTGGATAGCGAGAAGAGTGGAGGCTC2620.2532893782809192No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT2540.2455553514631812No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCACTGAGCTGAGGGTCACTTCT2520.2436218447587467No Hit
CATAGAAGTACCATCAGAGTGAACAGGAAACATTGGAAAGATGGGGATCT2440.23588781794100872No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC2290.22138651765774997No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACTGAGCTGAGGGTCACTTCTAT2280.22041976430553276No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG2140.20688521737449125No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT2120.20495171067005674No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA2040.19721768385231875No Hit
CATAGAGTCCTTCCCTCTCACACATGTCCCCAGGTAGCAAAACAGAGTCT2040.19721768385231875No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAACAGAAGTGTATTA2040.19721768385231875No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACAATGCCTCACACACAGGTCTAT2000.19335067044344978No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT1910.18464989027349452No Hit
CATAGAGCCCCCAGAGAAGAATGACCAGCCCCCAGGTAGCAAAACAGAGT1910.18464989027349452No Hit
CATAGATCACCAGATGCCAGTTGTGATCTACAGTTTCAATACTATGCCTC1900.18368313692127727No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGACCTTTTTCTGTAGTCAAGT1890.18271638356906003No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC1830.17691586345575655No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTACGGCAACATATCAGAAGCAT1770.17111534334245304No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTTCAGCTCTTTGAGGCATCTAT1770.17111534334245304No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTACGGAAGACACAGCA1730.16724832993358404No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACGGCAACATATCAGAAGCAT1720.1662815765813668No Hit
CATAGACACACTGACAATTTGCACCTGTCTTCAGCTCTTTGAGGCATCTA1700.1643480698769323No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT1700.1643480698769323No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC1700.1643480698769323No Hit
CATAGACCATCCCTTCTACAAGAGGCAACAATGCCTCACACACAGGTCTA1670.16144780982028056No Hit
CATAGAGGCACAGGGATAATGAGGGAGATAGACCTTTTTCTGTAGTCAAG1650.15951430311584605No Hit
CATAGAACCAACCTCTCTATCTCCGTAAGACCTTTTTCTGTAGTCAAGTG1640.1585475497636288No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA1630.15758079641141157No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGAAGACACAGCACACTCT1620.15661404305919432No Hit
CATAGACGAATTGCCCATGTCAGTAAATCTACGGCAACATATCAGAAGCA1600.1546805363547598No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGGAAGACACAGCACA1600.1546805363547598No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT1590.15371378300254257No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAGACCTTTTTCTGTAGTCA1570.15178027629810806No Hit
CATAGAGCCCCCAGAGAAGAATGACCTACGATAGCGAGAAGAGTGGAGGC1500.14501300283258733No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGGAAGACACAGCACACTCTTCT1490.1440462494803701No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT1400.13534546931041483No Hit
CATAGAACCAACCTCTCTATCTCCGTAGGAATCTTTGGGAGGCTATTAGT1380.13341196260598034No Hit
CATAGAGTCCTTCCCTCTCACACATGTACGGAAGACACAGCACACTCTTC1380.13341196260598034No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGGCAGAGAGTGTGTTGTATTCT1370.13244520925376307No Hit
CATAGAAGTACCATCAGAGTGAACAGGTCACTGACAGGTCTTAAAGCTCT1310.1266446891404596No Hit
CATAGAAGTACCATCAGAGTGAACAGGAGGAGCTGACTTACTGTTCTATG1290.12471118243602511No Hit
CATAGATCCCATACTCCTCCATTACCCTACGGCAACATATCAGAAGCATC1290.12471118243602511No Hit
CATAGAAACAGCAAAGCCCTCCACCATAGGGCACTGAGACCACATCTATG1260.12181092237937335No Hit
CATAGATGGGATTATAGGTGTGAGCCATTGCGCCTGGCCAAAAATTTCCA1250.1208441690271561No Hit
CATAGAGTCCTTCCCTCTCACACATGTTACGGTAGCTTACACTGCACATG1240.11987741567493886No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC1200.11601040226606986No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC1190.1150436489138526No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTGCATTCTCTCAGGG1160.11214338885720085No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA1160.11214338885720085No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAATCTTTGGGAGGCTATTAGTCT1160.11214338885720085No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCACTGAGCTGAGGGTCACTTC1140.11020988215276638No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGGAGGAGCTGACT1120.10827637544833188No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGTAGAGAGTTCTGTAGATGTTC1110.10730962209611462No Hit
CATAGAGCCCCCAGAGAAGAATGACCTCTAGCCAAATTCCTTACCGATCT1100.10634286874389737No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG1100.10634286874389737No Hit
CATAGACGAATTGCCCATGTCAGTAAATCTACGATAGCGAGAAGAGTGGA1040.10054234863059387No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1040.10054234863059387No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTAGCCAAATTCCTTACCGATCTA1040.10054234863059387No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)