FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807495

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807495
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11352
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG592652.20225510923186No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA3593.1624383368569418No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC2211.9467935165609584No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG2171.9115574348132487No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG1621.427061310782241No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC1521.3389711064129668No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG1511.3301620859760395No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG1191.0482734319943623No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC1070.9425651867512332No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC870.766384778012685No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA770.6782945736434108No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT660.5813953488372093No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT610.5373502466525722No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA520.4580690627202256No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT500.4404510218463707No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT420.36997885835095135No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA410.36116983791402396No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT390.34355179704016914No Hit
CATAGATCAAGGAAAACACCAGCCCATGCAAACTGTTCTAGGCAGAAGAA370.3259337561663143No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG340.29950669485553205No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA330.29069767441860467No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG310.2730796335447498No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG310.2730796335447498No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG260.2290345313601128No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG260.2290345313601128No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT230.2026074700493305No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG230.2026074700493305No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTTTGCAGATTTGGACCTGCG210.18498942917547567No Hit
CATAGACGTGACTAAAAGCATGTTGGTCAGGCTGGTCTTGAACTCCCGAC210.18498942917547567No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG200.1761804087385483No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT200.1761804087385483No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT190.16737138830162085No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG190.16737138830162085No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG190.16737138830162085No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG180.15856236786469344No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG180.15856236786469344No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG180.15856236786469344No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGACGCTATACCACACTACA180.15856236786469344No Hit
CATAGATCAAGGAAAACACCAGCCCAGGAGGAGACTTGACTCGCCTGAGG170.14975334742776603No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG170.14975334742776603No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGAAAGTCATAAAACTGCACATCA160.14094432699083861No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG160.14094432699083861No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT150.1321353065539112No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTGCTGAAGTGATGGGCTAG150.1321353065539112No Hit
CATAGATCATGGGACTTCAGCATGGCTGCGGAGGACTCAGGAAACTTACA150.1321353065539112No Hit
CATAGAGAAGACTCCCTCAACCCACCTGGTTCTACACATAGAGTGTCTGT150.1321353065539112No Hit
CATAGATCAAGGAAAACACCAGCCCAAAGGCTAGGACAGCAAGAACTGGA150.1321353065539112No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTGCATGACAGAGCGAGACTTCTA140.12332628611698379No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA140.12332628611698379No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC140.12332628611698379No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGACATGGTTCTAC140.12332628611698379No Hit
CATAGATCATGGGACTTCAGCATGGCCTGGGCTCCTCTGCTCCTCACCCT130.1145172656800564No Hit
CATAGATCAAGGAAAACACCAGCCCAGGAAACCATTTATTCCTCCTAGGC130.1145172656800564No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA130.1145172656800564No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTTGCATGACAGAGCGAGAC130.1145172656800564No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGACATGGTTCTACACA120.10570824524312897No Hit
TAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCGAG120.10570824524312897No Hit
CATAGATCATGGGACTTCAGCATGGCCCCCTGCCCATCATTCCTGACTCA120.10570824524312897No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGAG120.10570824524312897No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG120.10570824524312897No Hit
CATAGATCACGTAGAAACTGGAGAGGCTCACACTTGTCACCTTCAGCCTC120.10570824524312897No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTGGTCAAAACCTACCCATAGGC120.10570824524312897No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGCCAGGCTGGAGCAGGAATCAGG120.10570824524312897No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTTGACCTGCG120.10570824524312897No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)