FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807496

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807496
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11352
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA572850.45806906272022No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA3523.10077519379845No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG2221.9556025369978858No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG2141.8851303735024665No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG1581.3918252290345312No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC1541.3565891472868217No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG1521.3389711064129668No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG1221.0747004933051445No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC1080.9513742071881607No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA850.7487667371388302No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA770.6782945736434108No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT660.5813953488372093No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT650.5725863284002819No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA600.5285412262156448No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT570.5021141649048625No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA500.4404510218463707No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT420.36997885835095135No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT420.36997885835095135No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT410.36116983791402396No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT380.3347427766032417No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA380.3347427766032417No Hit
CATAGATTCAGAGAAGGACAGCGTGGTCACATAGGTTGCTAGACAGATTT370.3259337561663143No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG370.3259337561663143No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA350.3083157152924595No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT310.2730796335447498No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA300.2642706131078224No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA260.2290345313601128No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA260.2290345313601128No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA230.2026074700493305No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT230.2026074700493305No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA220.1937984496124031No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT200.1761804087385483No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG190.16737138830162085No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGTAAAGGCTGGGGTCTT180.15856236786469344No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA180.15856236786469344No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG170.14975334742776603No Hit
CATAGAGCAACAATGAAGGTGCACAAAGGTGTTCCTGGCTCCAGCTGACC170.14975334742776603No Hit
CATAGAGGTGAGCGGCTGTCTCCACACCCTGCCACTCTTCCTTAGTGAAG170.14975334742776603No Hit
CATAGAGCAACCCCAGCAGTTTGAGAGGCCAAGGCGGGTGGATCACCTGA170.14975334742776603No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG160.14094432699083861No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCAGG150.1321353065539112No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA150.1321353065539112No Hit
CATAGATGCCACCACACCCAGTTAATTTTTGTATTTTTAGTAGAGATGGG150.1321353065539112No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC150.1321353065539112No Hit
CATAGATCTAGCCCATCACTTCAGCACACTGTCATTGTGGGTTTTAACTA150.1321353065539112No Hit
CATAGAGGTGAGCGGCTGTCTCCATGACATGTCAGAAGTCTTCATGGTAG140.12332628611698379No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA140.12332628611698379No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG140.12332628611698379No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCC140.12332628611698379No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG140.12332628611698379No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGCCACCACACCTGGCCTATG140.12332628611698379No Hit
CATAGAAGTCTCGCTCTGTCATGCAACAACAACAAAACTCGTGACTTCTA130.1145172656800564No Hit
CATAGAAGGAACAGCAGAGAGGGCAGAGACCGCCTTCTCTGTGTGAACTC130.1145172656800564No Hit
CATAGACCCTCTCTTACCCTTCCACCATGATTGTAAGTTTCCTGAGTCCT130.1145172656800564No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT130.1145172656800564No Hit
CATAGAAGTCTCGCTCTGTCATGCAACACTGTCATTGTGGGTTTTAACTA130.1145172656800564No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT130.1145172656800564No Hit
CATAGAAGTATTCACACTGGGGCCCAAGCATCATGACAATTTGTTCTTCA120.10570824524312897No Hit
CATAGAAGTATTCACACTGGGGCCCATTCTGTTATGCACTTGGTTCTGGG120.10570824524312897No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAAAGCCTTCAGGTCA120.10570824524312897No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)