FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807501

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807501
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences132957
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC93167.006776627029791No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA72785.473950224508676No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC71495.3769263746925695No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA67115.047496559037885No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT43163.246162293072196No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA41243.1017547026482246No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA39042.9362876719540907No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA38472.8934166685469735No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA37732.8377595764044012No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT27412.0615687778755536No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT23671.7802748256955256No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC21731.634362989537971No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA19111.4373067984385928No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA18251.3726242318945223No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT17601.3237362455530735No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA16951.2748482592116248No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG16471.2387463616056318No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC14761.1101333513842822No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT12960.9747512353618087No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT12270.9228547575531938No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG11170.8401212422061268No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA11070.8326000135382116No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT11040.8303436449378371No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC10930.8220702934031303No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA10350.7784471671292222No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG9880.7430973923900208No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC9850.7408410237896462No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT9660.7265506893206074No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG9340.7024827575832787No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT9010.6776627029791588No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT8860.6663808599772859No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG8070.6069631535007559No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA7580.5701091330279714No Hit
CATAGACCCCCATGCAACCACATCTATACAATGGGCACACTTAACACCTC7540.5671006415608053No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC7310.5498018156246004No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT7080.5325029896883955No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA6910.5197169009529397No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA6010.452025842941703No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC5810.4369833856058726No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG5800.436231262739081No Hit
CATAGACAGAACACCACACCCCTGTCCTTAGGAGTTCTGGCCCCTGTCTA5800.436231262739081No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT5800.436231262739081No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA4910.36929232759463587No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA4890.36778808186105283No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGTATATGACACATTACACCAG4760.3580104845927631No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA4560.3429680272569327No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGGATGACTTATGGAATCTGAA4480.33695104432260053No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT4290.3226607098535617No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA4210.31664372691922954No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT4130.31062674398489737No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA4090.3076182525177313No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA4080.3068661296509398No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA4060.30536188391735675No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG3950.29708853238265004No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA3890.2925757951819009No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA3890.2925757951819009No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA3740.2812939521800281No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA3610.2715163549117384No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT3490.26249088051024017No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT3360.2527132832419504No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC3310.24895266890799284No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA3290.24744842317440977No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG3230.24293568597366066No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATCCATCAGAGCATCACCCC3130.23541445730574545No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC3080.23165384297178787No Hit
CATAGAAAAGTCACCATGCAGCCCTGAGGTTCTTCAACACAGCTATTCTA3070.23090172010499635No Hit
CATAGACCCCCATGCAACCACATCTATCCCCTTCATTTTGCTGGAACTCT3030.22789322863783026No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG3030.22789322863783026No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG2950.2218762457034981No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT2730.20532954263408468No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT2720.2045774197672932No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC2640.19856043683296104No Hit
CATAGATCTGGGAGGTGAAGAGGACAGTGGTGAAAAGTAGGGGACAGTTC2500.18803071669787977No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA2400.18050948802996458No Hit
CATAGATGCACCAGAAGCCACCTACCGTATGTACAAACCAAACAATAGCC2390.17975736516317306No Hit
CATAGAATTGCCTACTTTGGGACCCATCGGCCGCACTGAAATTGTCTATG2340.17599675082921545No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA2210.16621915356092573No Hit
CATAGAATCCCTGCCCTTGACCTTGGTCTGTCATAAAACAATGGGCACAC2060.15493731055905294No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTTAGGAGTTCTGGCCCCT2010.15117669622509533No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC2000.1504245733583038No Hit
CATAGATTTGGCACTCACATACACGCTCTCTTCCGCCTTTATCCTTCTAT1980.14892032762472077No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGAAAATGTCAGTGGGCCA1970.14816820475792924No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGGAAAATGTCAGTGGGCCATCTA1970.14816820475792924No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGAACAAGGGCATGGTCAAG1950.14666395902434623No Hit
CATAGACAGTCCTGCCGTGTACATGTCGACAAGCACATTATTATTGGTTG1850.13914273035643102No Hit
CATAGATGCACCAGAAGCCACCTACCCCCCTTTACCTACCTTCTCAGCTC1750.13162150168851583No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC1740.1308693788217243No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCTCTGCTACC1730.13011725595493281No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTAGAACAAGGGCATGGTCAAGTG1700.12786088735455822No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC1680.1263566416209752No Hit
CATAGAACTTGTGCTTTTGGTGTCACAGCCCAGTTTTCCTTCTCTATGAG1670.12560451875418369No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT1660.12485239588739218No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATTGTCCTTGCACACCATGG1640.12334815015380912No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAGGTTTTCCGGCTTGAGGTT1630.1225960272870176No Hit
CATAGAGAAAGGCAGGCGAAGTTAGCTCTCTTCCGCCTTTATCCTTCTAT1630.1225960272870176No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT1620.12184390442022609No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCTTAGGAGTTCTGGCC1600.12033965868664305No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1560.11733116721947696No Hit
CATAGAGACCCCCAAGTAGCCTAACTGTGCCCTGTGATTGTCCTGGTCTA1480.11131418428514481No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGAGGTTCTTCAACACAGCTATTC1440.10830569281797874No Hit
CATAGAATTCCCCAATGTCCTGTGCATAGAATTCCCAGTGCCCTGTGATT1430.10755356995118723No Hit
CATAGACCATGTAATACCATCGTGAGCAGCCTTCTCTGATACCATCCCTC1430.10755356995118723No Hit
CATAGATCTGGGAGGTGAAGAGGACATCTGGGAGGAACAGGGAGATGTTC1400.10529720135081266No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCACCTGGCAAAAGGGTAAGAGTTCT1380.10379295561722963No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)