FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807505

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807505
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45435
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2146947.252118410916694No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA14173.118741058655222No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC7911.7409486079013978No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT7901.7387476614944428No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTTCTAC6921.5230549136128535No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT4350.957411687025421No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC4110.9045889732585012No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC4050.8913832948167713No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT3770.8297567954220314No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG3340.7351160999229669No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT3100.6822933861560471No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT3050.6712886541212721No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG2950.6492791900517223No Hit
CATAGAGGGTGTTTTTCGGTGTCACACTGACGACATGGTTCTACACATAG2600.5722460658082975No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA2450.5392318697039727No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG2380.5238252448552878No Hit
CATAGACCCTTAGAGTTTCAGCCTCCCAAACTGCTGAGATTCCAGGCATG2010.4423902277979531No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA1890.4159788709144932No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA1850.4071750852866733No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA1830.4027731924727633No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC1790.3939694068449433No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGAGAGGCTGTTTGAGATC1700.3741608891823484No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGCCCCCAGTATTTCAT1700.3741608891823484No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC1680.36975899636843845No Hit
CATAGAACAAGGCCAGAATTACCCTGCGACATGGTTCTACACATAGAACA1650.36315615714757343No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1610.3543523715197535No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC1470.32353912182238365No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTGTTAC1460.32133817541542864No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1430.3147353361945637No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT1430.3147353361945637No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC1370.3015296577528337No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1320.29052492571805877No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACGACATGGTGG1280.2817211400902388No Hit
CATAGACAGGAGGAGGAAGAAGAGGAAGCCGTGGGGTGGGGAAGATTCAT1240.2729173544624188No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT1240.2729173544624188No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC1230.2707164080554639No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1180.2597116760206889No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG1160.2553097832067789No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1120.24650599757895897No Hit
CATAGAACAATGTAATAAGCATCGGAGGACCATGCTCACACCTTGATCTA1100.24210410476504896No Hit
CATAGAACAAGGCCAGAATTACCCTGGGCAACAGAACAACAACATCTATG1100.24210410476504896No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1060.233300319137229No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT1040.22889842632331905No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTGATGTGCAGCTGTGGCCC1030.22669747991636405No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1020.22449653350940904No Hit
CATAGAACAATGTAATAAGCATCGGAGGACACTGACGACATGGTTCTACA980.2156927478815891No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG930.20468801584681415No Hit
CATAGACAGGAGGAGGAAGAAGAGGATCACTTGGGTCCAAGAGTTTGAAG920.20248706943985914No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG890.19588423021899415No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTGGGTGCCTG860.1892813909981292No Hit
CATAGAATGCAGGAGAATATACACAGGTTACATAGAATTAGCGGAGAGTG820.1804776053703092No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACTATGAGACCGAGGCCTGAG810.17827665896335423No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACACTGACGACATGGTGGG810.17827665896335423No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTGACGACATGGTGGGTGCC800.17607571255639926No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG790.17387476614944428No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTGGGCAACAGAACAACAAC790.17387476614944428No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTTCTACACA770.16947287333553426No Hit
CATAGACAGCTCACAGACTGCATACTAACACTGACGACATGGTGGGTGCC760.16727192692857928No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT750.1650709805216243No Hit
CATAGACAGGAGGAGGAAGAAGAGGAAGAAGAAGAGAGCCTCTGTCCCTG740.1628700341146693No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC740.1628700341146693No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGTGAGAAATGATGATGGC690.15186530207989435No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG690.15186530207989435No Hit
CATAGAGCTATCAGTATACTCCCACCATGAGGAATTCTTGCCAGGGATCT680.14966435567293937No Hit
CATAGAGAAGAGAAGGCGACAATGGCTTGAACCCGGGAGGAGGTTGCAGC610.13425773082425443No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGACGACATGGTGGGTG610.13425773082425443No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC580.12765489160338944No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGATCTGCG580.12765489160338944No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG550.12105205238252448No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCTGACGACATGGTTCTACACATAG550.12105205238252448No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTAGCTTGGGTGACAGAGTG540.1188511059755695No Hit
CATAGAGGGTGTTTTTCGGTGTCACAGATCTAGACTCTTCACTATGTCAT530.1166501595686145No Hit
CGTAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG520.11444921316165953No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTTGACCTGCG520.11444921316165953No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGCTGGGTGAGAAATGATGAT510.11224826675470452No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCGACATGGTTCTACACATAGAACC480.10564542753383956No Hit
CATAGATCATGGGACTTCGGCATGGCGGTGTTTGCAGATTTGGACCTGCG480.10564542753383956No Hit
TAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCGAG470.10344448112688455No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACGACATGGTTCTACACATAGAAC470.10344448112688455No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA460.10124353471992957No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)