FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807507

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807507
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences117267
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA1227510.467565470251648No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG67565.761211594054593No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC57634.914426053365397No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG56954.856438725302088No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG45573.886003735066131No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA40463.450246019766857No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA33582.8635507005380885No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA33232.8337042816819737No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT29852.545473151014352No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG26402.251272736575507No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA25422.167702763778386No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA21921.8692385752172394No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC19331.6483750756819908No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC18641.5895349927942215No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC18501.577596425251776No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT16991.4488304467582525No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT15681.3371195647539376No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA15561.3268865068604125No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA12021.0250112990014242No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG11971.020747524879122No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT11220.9567909130445905No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA10300.878337469194232No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG10220.8715154305985486No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT9030.7700376064877587No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT8480.7231360911424356No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA6610.5636709389683372No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA5930.5056836109050288No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGACGATCATTGTTCACTGCA5480.46730964380430984No Hit
CATAGAGTCCAACTATTCCAGCACCACGCTGTCCTTCTCTGAATCTATGA5270.44940179249064105No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC5260.4485490376661806No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA5240.44684352801725974No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGCTATACCACACTACA5090.43405220565035346No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG4980.42467190258128884No Hit
CATAGATGGCCAAGATACGAGCACATTGCTTCTTGTGGTAACTGGTCTAT4960.42296639293236804No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGTGTCTACACTGTCATTGT4860.4144388446877638No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA4860.4144388446877638No Hit
CATAGATGTGTAGCCTGGGTCTGACACCGTATGAGGAGCTGAGTCATGGG4750.4050585416186992No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG4610.3931199740762534No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTTGAGGAGCTGAGTCATGG4470.38118140653380744No Hit
CATAGATCACGTAGAAACTGGAGAGGCATGTCCAAGGGGTAAGGCGTACT4360.3718011034647428No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT4240.3615680455712178No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG4110.3504822328532324No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGATCATTGTTCAC4110.3504822328532324No Hit
CATAGACATTTAATCCTCACAATGACCCATCTGTTTCCCCACTCAAATAC3990.34024917495970736No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTACGCTATACCACACTACA3960.3376909104863261No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG3890.33172162671510314No Hit
CATAGATGTGTAGCCTGGGTCTGACAAATGAGAAACCTGGATGCTTCTAT3790.3231940784704989No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGATCATTGTTCACT3750.31978305917265726No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTGGTGGAAGGGTAAGAGAG3580.3052862271568301No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT3530.301022453034528No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTATGAGGAGCTGAGTCATG3290.28055633724747797No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT3260.2779980727740967No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTACACTGACGATCATTGTTCA3120.26605950523165084No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGCCCTCTCTGCT3080.2626484859338092No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTCTGCCTCTAAGTAAACTG3040.25923746663596753No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGACATGGTTCTACACA3020.2575319569870467No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT2810.23962410567337786No Hit
CATAGACGTGACTAAAAGCATGTTGGTCAGTGTCTGCCCTCTCTGCTGTT2640.2251272736575507No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTGGCTCAGGTATGTCTTTA2610.22256900918416947No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACACCCACAGCCAGGAAAGAAT2530.2157469705884861No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTTGTTCTTCCTTTTCTGCC2510.21404146093956528No Hit
CATAGACCAGCAGACACTCCCATCATTTGCCATCTATGAGACCAAGTCTC2420.20636666751942148No Hit
CATAGAAATGATGCTGAAGGGCCTGGATGCTGAAGTGATGGGCTAGATCT2410.20551391269496105No Hit
CATAGATCATGGGACTTCAGCATGGCCATGTTCTTCCTTTTCTGCCTTCA2350.20039738374819857No Hit
CATAGACCTCCGACAGTTTTTATGCACTGGTTCTACAAAGGATTCTGGGC2340.19954462892373814No Hit
CATAGACTCATTGCACTTTCCACAACTGTCGTACACTGACGCTATACCAC2320.1978391192748173No Hit
CATAGACGGATTATTCTCTCCATGGTCTCTGCTACCGTACAAGGGGTAAG2220.1893115710302131No Hit
CATAGACTCATTGCACTTTCCACAACTGTTCTTCCTTTTCTGCCTTCATC2220.1893115710302131No Hit
CATAGACCTCCGACAGTTTTTATGCACACACTGACGACATGGGTCTACCA2220.1893115710302131No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGATCATTGTTCACTGC2210.1884588162057527No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTTGCATGACAGAGCGAGAC2180.1859005517323714No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT2170.185047796907911No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTATGGTGGAAGGGTAAGAGAG2120.1807840227856089No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGCTATACCACACT2110.1799312679611485No Hit
CATAGACACAACAGAGAGAACGGGCTCATGGTTCTACACATAGAGTGTCT2110.1799312679611485No Hit
CATAGACGTGACTAAAAGCATGTTGGTCAGTGTAGGCTAATCTGAAATCT2080.17737300348776724No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG2000.17055096489208388No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG1990.16969821006762345No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG1870.15946515217409843No Hit
CATAGAAATGATGCTGAAGGGCCTGTGCTGAAGTGATGGGCTAGATCTAT1860.158612397349638No Hit
AAGGATTCTGGGCCATCTATGAGACCAAGTCTCTGCTACCGTAGAGCACG1840.15690688770071715No Hit
CATAGAGAAGACTCCCTCAACCCACCGTATACACAAATGAGAAACCTGGA1770.15093760392949424No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCACACTGACGCTATACCACAC1740.14837933945611298No Hit
CATAGAAGGACAAAGACATTTAGGACCCCACTGACGACATGGTTCTACAA1730.14752658463165255No Hit
CATAGAAGGACAAAGACATTTAGGACCCACGCTGTCCTTCTCTGAATCTA1700.1449683201582713No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGTCCCAACTGTCTCTGA1620.13814628156258793No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG1610.1372935267381275No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT1600.1364407719136671No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTGTCCCAACTGTCTCTGAA1570.13388250744028585No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA1540.1313242429669046No Hit
CATAGAAATGATGCTGAAGGGCCTGCATAGAAATGATGCTGAAGTGATGG1490.12706046884460248No Hit
CATAGAGAAGACTCCCTCAACCCACCATTTGAGAGATCCCACCATTTGCC1460.12450220437122124No Hit
CATAGATCACGTAGAAACTGGAGAGGCATATCCAAGGGGTAAGGCGTACT1360.11597465612661703No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGACATGGTTCTACAAA1360.11597465612661703No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGACATGGGTCTAC1360.11597465612661703No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGACGACATGGTTCTACACATAGA1350.11512190130215662No Hit
CATAGACACAACAGAGAGAACGGGCTACGGTAGCAGCATAATTTCCCATG1350.11512190130215662No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT1340.1142691464776962No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT1340.1142691464776962No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCCATAGAAATGATGCTGA1330.11341639165323578No Hit
CATAGACCTCCGACAGTTTTTATGCACACACTGCGACATGGGTCTACCAG1300.11085812717985452No Hit
CATAGAGAAGACTCCCTCAACCCACCAATGGTGGAAGGGTAAGAGAGGGT1300.11085812717985452No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGATCATTGTTCACTGC1290.11000537235539411No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)