FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807511

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807511
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences162659
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG135578.334614131403734No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG95975.900073159185782No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA95175.850890513282389No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC79644.896132399682772No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA73964.546935613768682No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA73604.524803423112155No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC57703.5472983357822194No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGAAAGCAATCACCGCCAGTCTAT44752.7511542552210453No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG44602.741932509114159No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC38142.344782643444261No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT36362.2353512563092113No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA28721.7656569879318085No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA27801.709096945142906No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG26641.6377821085829865No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG23731.4588802341093945No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA19971.2277217983634474No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGACACTGACGACATGGTTCT16020.9848824842154446No Hit
CATAGACTCAAGCAATCCTCCCACCTACACTGACGACATGGTTCTACACA15210.9350850552382592No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA14210.8736067478590179No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAAGTTTTTCCAAATATAA13940.8570076048666229No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC12720.7820040698639485No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT12630.7764710221998168No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG11700.7192961963371224No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTACACTGACGACATGGTTCTAC11440.7033118364185197No Hit
CATAGATCATGGGACTTCAGCATGGCATGTTGAGATGAATAATTGAGACT10990.6756465980978611No Hit
CATAGACCCTTCTCCATGCCACATCATGCAAAGCTGGTCTATGAGACCAA10470.6436778782606557No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA10470.6436778782606557No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGCTAGTCCGTCACCCCTAATC10250.6301526506372226No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTATTAGTGGT10000.6147830737924124No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA9310.5723630417007358No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGAGGGAA8250.5071960358787402No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGAGGGAAGGAAGGGCAAACTC7940.4881377605911754No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC7790.47891601448428917No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTTCTTATAGCCAGTGTCTCCC7430.45678382382776234No Hit
CATAGATGTGCCTCTCCAACATTCACCAAGTCACCCAGCCTCTATGAGAC7260.44633251157329135No Hit
CATAGATCATGGGACTTCAGCATGGCCATGGGTCCTTTTCACATCATCTA7170.44079946390915964No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT7160.4401846808353672No Hit
CATAGATGTGCCTCTCCAACATTCATACACTGACGGAGTGAGGGCAGTAA7070.43465163317123556No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGCCATGTCTTCTGTGTTTG6420.3946907333747287No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCAGGGATTATCAGTAGTGCTCACA6280.386083770341635No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAAACCACTTGAACATTGCCTT6170.37932115652991844No Hit
CATAGATCATGGGACTTCAGCATGGCTCATGAAAACCACTTGAACATTGC6020.37009941042303224No Hit
CATAGACCATTTGCCGCGTTCTGAAGCACATAGATCATTTCCCCTCTCTC6010.3694846273492398No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG5880.36149244738993846No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGCTAGTC5720.35165591820925984No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTGGAGGGAAGGAAGGGCAAACT5700.35042635206167505No Hit
CATAGATCATGGGACTTCAGCATGGCCACCATTGGAGACAGCCGCTCACC5550.34120460595478885No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTCTAATAGTTTTTCCAAATATA5220.32091676451963924No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT5170.3178428491506772No Hit
CATAGAACACAGATCTGCTTGGAGGTACACTGACGCCATGGGTCCTTTTC5080.31230980148654547No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT4870.2993993569369048No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGAGGAAAGCAATCACCGCCAGTC4830.2969402246417352No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC4820.2963254415679427No Hit
CATAGACTCAAGCAATCCTCCCACCTCTCATAGACACCATTGGAGACAGC4740.29140717697760343No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCATGGGTCCTTTTCACATCAT4640.2852593462396793No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG4640.2852593462396793No Hit
CATAGATCATGCAAAGAACACAGGCCGATCATGAGGTCAGGTCTATGAGA4460.2741932509114159No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGCAGATCATGAGGTCAGGTCTA3960.2434540972217953No Hit
CATAGATTAAGTGCAGCTATATTGGAGGAAAAGTCTATGAGACCAAGTCT3620.22255147271285328No Hit
CATAGATCATGGGACTTCAGCATGGCAGATCATGGGACTTCAGCATGTTG3530.21701842504872154No Hit
CATAGATGTGCCTCTCCAACATTCATGAAAGAGCATGTTGAGATGAATAA3430.21087059431079744No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACAGGGGGCAGATT3180.19550101746598714No Hit
CATAGAACTTTGTGCCCCCAGTGTCTGCTACCGTAGGCTAGTCCGTCACC3070.18873840365427058No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT2940.18074622369496923No Hit
CATAGAACACAGATCTGCTTGGAGGTACACTGACGACATGGTTCTACACA2930.18013144062117684No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAATAGTTTTTCCAAATATAAG2850.17521317603083753No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCTTCTTATAGCCAGTGTCTCCCC2800.17213926066187546No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATAA2720.16722099607153618No Hit
CATAGATCATGGGACTTCAGCATAGCATGTTGAGATGAATAATTGAGACT2410.14816272078397136No Hit
CATAGATGTGGCTATGCAGACTGAGTGCAGCTATATTGGAGGAAAAGTCT2400.14754793771017896No Hit
CATAGATGTGGCTATGCAGACTGAGTGGGGGCAGATTAACAGGTCATCTA2350.14447402234121692No Hit
CATAGATCTTAGGTAGAGGAGTTTCAAACATCTATGAGACCAAGTCTCTG2340.1438592392674245No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCATGGTTCTACACATAGAACT2280.14017054082467No Hit
CATAGAACACAGATCTGCTTGGAGGCAGATCATGAGGTCAGGTCTATGAG2140.13156357779157626No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGCG2100.1291044454964066No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAAGAATGAGGAGAGTACTACTT2070.12726009627502935No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTGCCCCACCCTTATGATCGTAT2060.12664531320123695No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATAA2040.1254157470536521No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT2010.12357139783227489No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAAA1900.11680878402055835No Hit
CATAGACTCAAGCAATCCTCCCACACTCATGCAAAGCTGGTCTATGAGAC1880.11557921787297351No Hit
CATAGATCATGGGACTTCAGCATGGCTAGTCCGTCACCCCTAATCTATGA1870.11496443479918111No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTTCTTATAGCCAGTGTCTCCCCT1820.11189051943021905No Hit
CATAGAAGGAGGGGAAACTGAGGCCATGGGTCCTTTTCACATCATCTATG1820.11189051943021905No Hit
CATAGAGAGGTCGCCCAGGTATTTCTTATAGCCAGTGTCTCCCCTCTATG1740.10697225483987975No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGAGGGAAGGAAGGGCAAACTCT1720.10574268869229493No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAACATGGTTCTACACATAGAG1670.10266877332333285No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)