FastQCFastQC Report
Wed 8 May 2024
EGAF00005807517

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807517
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences118409
Total Bases17.7 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG77516.545955121654604No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG56674.785953770405966No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA45993.8839953044109823No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA45983.8831507740121105No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG43683.6889087822716182No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG32712.762458934709355No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT30052.537813848609481No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA26522.2396946178077677No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC25772.17635483789239No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGAAAGCAATCACCGCCAGTCTAT22071.8638785903098583No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC21761.8376981479448353No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG20061.694127980136645No Hit
CATAGATCAACAATGGATGAGCAAAAGGCAGATCATGAGGTCAGGTCTAT12481.0539739377918906No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA11370.9602310635171313No Hit
CATAGAGGTCGCAGCTACCCAGAAAGGCAGATCATGAGGTCAGGTCTATG9720.8208835477032996No Hit
CATAGATCATGGGACTTCAGCATGGCTAGTCCGTCACCCCTAATCTATGA9270.7828796797540727No Hit
CATAGACTCAAGCAATCCTCCCACCTTACGGGGGCAGATTAACAGGTCAT8830.7457203422037176No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC7400.6249524951650635No Hit
CATAGATGTGCCTCTCCAACATTCATTCACCAAGTCACCCAGCCTCTATG7330.6190407823729616No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCATTTCCCCTCTCTCTGAATAACTC7260.6131290695808596No Hit
CATAGAGGTCGCAGCTACCCAGAAAGGCCGTCCCTGAGCACTCCATTCAA7140.6029947047943991No Hit
CATAGACCCTTCTCCATGCCACATCAGGGATTATCAGTAGTGCTCACATC6910.5835705056203497No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA6820.5759697320305044No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGTGTAGGGATTATCAGTAGTGCTC6690.5649908368451723No Hit
CATAGATGTGCCTCTCCAACATTCATACACTGACGGAGTGAGGGCAGTAA6630.5599236544519419No Hit
CATAGAGGGGCATGCTGGATAAATCTTAGGTAGAGGAGTTTCAAACATCT6590.5565455328564551No Hit
CATAGATCACCTACACAGACAGCTTTCCTACGGGGGCAGATTAACAGGTC6120.516852604109485No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAGGAGGGAAGGAAGGGCA5850.4940502833399489No Hit
CATAGATCATGGGACTTCAGCATGGCTACGGTGTCAGAGATAGCACAGTG5830.49236122254220543No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA5500.46449171937943906No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAGCATGTTGAGATGAATA5460.4611135977839523No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG5300.44760111140200487No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG5060.42733238182908395No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT4870.4112863042505215No Hit
CATAGATGTGCCTCTCCAACATTCATGAGAAAACCACTTGAACATTGCCT4740.4003074090651893No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGCTAGTC4690.3960847570708308No Hit
CATAGAAGATCCCATAGCAGCTTTGCCATGTCTTCTGTGTTTGGTCTATG4600.3884839834809854No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTGGGGGCAGATTAACAGGTCAT4260.35976994991934735No Hit
CATAGATGTGCCTCTCCAACATTCACCAAGTCACCCAGCCTCTATGAGAC4260.35976994991934735No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTAACCATGAG4250.35892541952047563No Hit
CATAGAAGGAGGGGAAACTGAGGCCACACTCATGCAAAGCTGGTCTATGA4160.3513246459306303No Hit
CATAGAGAGGTCGCCCAGGTATTTCTTATAGCCAGTGTCTCCCCTCTATG4050.3420348115430415No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA3950.3335895075543244No Hit
CATAGACACCTGGATCCTGTGTTGTCTGCCATGTCTTCTGTGTTTGGTCT3930.331900446756581No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA3890.32852232516109414No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC3840.32429967316673564No Hit
CNTAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG3830.32345514276786397No Hit
CATAGAACACAGATCTGCTTGGAGGTACACTGAGCAGAGTTGGGTGTGTC3820.32261061236899224No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTAGCATGTTGAGATGAATAATT3690.31163171718366006No Hit
CATAGAACACAGATCTGCTTGGAGGTAGCATAGAGTAACCTCCTCCAGTC3640.3074090651893015No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCGGAGGGAAGGAAGGGCAA3550.2998082915994561No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG3530.2981192308017127No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCCGTGAGCCAAGT3510.29643017000396926No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGAAGGAGGGAAGGAAGGGCAAACT3380.2854512748186371No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGGAGGGAAGGAAGGGCA3350.28291768362202196No Hit
CATAGAGGTCGCAGCTACCCAGAAAGCATGGTTCTTATAGCCAGTGTCTC3330.2812286228242786No Hit
CATAGAGGGGCATGCTGGATAAATCTTAACTTCAGGGTGCTCCTCTATGA3280.27700597082992No Hit
CATAGATGTGCCTCTCCAACATTCATCAGTGTAAAACCACTTGAACATTG3270.2761614404310483No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG3160.26687160604345955No Hit
CATAGATCAACAATGGATGAGCAAAAGGGATTATCAGTAGTGCTCACATC3160.26687160604345955No Hit
CATAGAACTTTGTGCCCCCAGTGTCTACCGTAGGAAAGCAATCACCGCCA3150.26602707564458783No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCATACGGGGGCAGATTAACA3070.2592708324536142No Hit
CATAGATCACCCAGGTAATCACTAGGTACACTGAGCAGAGTTGGGTGTGT3010.2542036500603839No Hit
CNTAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG2970.2508255284648971No Hit
CATAGAGGGGCATGCTGGATAAATCTACACTGACCACACTCATGCAAAGC2930.24744740686941025No Hit
CNTAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2880.24322475487505174No Hit
CATAGATCATGGGACTTCAGCATGGCATGTTGAGATGAATAATTGAGACT2820.23815757248182148No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG2780.23477945088633467No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA2780.23477945088633467No Hit
CATAGATCACCCAGGTAATCACTAGGTAGGGATTATCAGTAGTGCTCACA2700.22802320769536097No Hit
CATAGATGTGCCTCTCCAACATTCATATGTTGAAACCTAGTCACCAAGGT2520.21282166051567025No Hit
CATAGACTCAAGCAATCCTCCCACCTCAACCCCCCAAAATGCTAGTTTTT2490.21028806931905514No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTACCATGGGTCCTTTTCACATC2490.21028806931905514No Hit
CATAGAGGGGCATGCTGGATAAATCTTACGGTAGCATGTTGAGATGAATA2480.20944353892018344No Hit
CATAGACCCTTCTCCATGCCACATCATTTCCCCTCTCTCTGAATAACTCT2450.20690994772356833No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT2400.2026872957292098No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTGACGGAGTGAGGGCA2380.20099823493146635No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGATCATGAGGTCAGGTCTAT2280.19255293094274928No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCATGGGTCCTTTTCACATCAT2220.18748574854951905No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAACATAAGCAAATGGGCATGT2220.18748574854951905No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTTAGGTAGAGGAGTTTCAAACAT2110.17819591416193026No Hit
CATAGACTCAAGCAATCCTCCCACCTACCCTGAAGTTTGAGAGCAAGTTC2060.17397326216757172No Hit
CATAGAGCTTCTGATCACTTTCGCCCTACGGGGGCAGATTAACAGGTCAT2050.17312873176870003No Hit
CATAGAAGGAGGGGAAACTGAGGCCATGTCTTCTGTGTTTGGTCTATGAG2020.17059514057208489No Hit
CNTAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA1930.1629943669822395No Hit
CATAGAGCTTCTGATCACTTTCGCCCCATGGGTCCTTTTCACATCATCTA1900.1604607757856244No Hit
CATAGAAGATCCCATAGCAGCTTTGCTATCGTAGTTTTTCCAAATATAAG1900.1604607757856244No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA1880.15877171498788098No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGAGGGAAGGAAGGGCAAACTCT1870.15792718458900928No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAATCAATGC1870.15792718458900928No Hit
CATAGAACCAGAGTAATGAGGGATGCTCCCCTGGAGTCAGAAATATGGAA1870.15792718458900928No Hit
CNTAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA1850.15623812379126586No Hit
CATAGACCCTTCTCCATGCCACATCATGCAAAGCTGGTCTATGAGACCAA1850.15623812379126586No Hit
CNTAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG1790.15117094139803564No Hit
CATAGACCCTTCTCCATGCCACATCAGGGTAAAGCCAGAGCTGCTCCCCT1770.14948188060029222No Hit
CNTAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT1710.14441469820706196No Hit
CATAGAAGATGGTCTGCTACACTGGTAGCACCCTGAAGTTTGAGAGCAAG1700.14357016780819026No Hit
CATAGACCCTTCTCCATGCCACATCATCTACCATGGGTCCTTTTCACATC1680.14188110701044684No Hit
CATAGATCTAGTACTGTAATTGTAGTGTGCAACACTGGAGACAGCCGCTC1650.13934751581383173No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCGGAGGGAAGGAAGGGCAAAC1620.1368139246172166No Hit
CATAGATGTGCCTCTCCAACATTCATGGGTCCTTTTCACATCATCTATGA1530.12921315102737124No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1510.12752409022962782No Hit
CATAGAACTTTGTGCCCCCAGTGTCTACCGTAAGGGATTATCAGTAGTGC1480.1249904990330127No Hit
CATAGATGTGCCTCTCCAACATTCATAGCACCCTGAAGTTTGAGAGCAAG1450.12245690783639757No Hit
CATAGAGAGGTCGCCCAGGTATTTCTATCATTAGAATACCTCATGTCTGC1370.1157006646454239No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTCTCCAGAACCCACCATCTATGA1310.11063348225219367No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCAACACTGAGCAGAGTTGGGTGTGT1270.10725536065670685No Hit
CNTAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC1260.10641083025783513No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGCACCCTGAAGTTTGAGAGC1260.10641083025783513No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCTTTCTTCTTCTGCAGAAATTGTGA1250.10556629985896343No Hit
CATAGAGCTTCTGATCACTTTCGCCCACACTCATGCAAAGCTGGTCTATG1230.10387723906122No Hit
CNTAGAAGAATTGCTTGAATCCGGGAGGAAAGCAATCACCGCCAGTCTAT1210.10218817826347659No Hit
CATAGAACTTTGTGCCCCCAGTGTCTGCTACCGTAGGAGGGAAGGAAGGG1200.1013436478646049No Hit
CATAGAAGAATTGCTTGAATCCGGGAGACCAAAAAACCACTTGAACATTG1200.1013436478646049No Hit
CNTAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA1190.10049911746573317No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAGGGATTATCAGTAGTGCT1190.10049911746573317No Hit
CATAGACTCAAGCAATCCTCCCACCTGGCACCCTGAAGTTTGAGAGCAAG1190.10049911746573317No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)