FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807520

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807520
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40002
Sequences flagged as poor quality0
Sequence length150
%GC39

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA438310.95695215239238No Hit
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT39389.84450777461127No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG19894.972251387430628No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG16634.157292135393231No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG16214.052297385130744No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG11682.919854007299635No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG10892.7223638818059097No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC9462.3648817559122044No Hit
CATAGATTCCTCCAAAGACTGCAGGGGTCAGTCTTCAGCCCACCCATGCC9402.3498825058747066No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG6231.5574221288935552No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT6071.5174241287935604No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT5831.4574271286435678No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG5461.3649317534123293No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA4961.239938003099845No Hit
CATAGATTCAGAGAAGGACAGCGTGGTCACATAGGTTGCTAGACAGATTT4751.1874406279686016No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC4521.1299435028248588No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG4261.0649467526623668No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA4141.0349482525873706No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT4121.0299485025748714No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT4121.0299485025748714No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGGTGCGATGGCTTTCTGACT3790.9474526273686316No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC3770.9424528773561323No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT3460.8649567521623918No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT3270.8174591270436479No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC3160.7899605019749012No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA2760.6899655017249138No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACCCTGGGAGAAGAAA2610.6524673766311684No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT2540.6349682515874205No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT2480.6199690015499225No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT2430.6074696265186741No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG2150.5374731263436828No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT2090.5224738763061847No Hit
CATAGATGCCACCACACCCAGTTAATTTTGTCTTTTTAGTAGAGATGGGA1860.4649767511624419No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT1840.4599770011499425No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC1710.4274786260686966No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTACCAACATGCTTTTAG1700.42497875106244687No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGAGCATGCCTTTGAT1570.39248037598120095No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG1540.3849807509624519No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT1500.3749812509374531No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT1450.3624818759062047No Hit
CATAGAGCAACCCCAGCAGTTTGAGACCATGGAGAGAATAATCCGTCTAT1370.3424828758562072No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG1280.31998400079996No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG1110.2774861256937153No Hit
CATAGAGCAGCTTGAATTCTCCTCAGAAAATGGGATTTTCTTTTCTATTG1060.26498675066246685No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTAGTGGGACAGCATCTGGGTC1040.2599870006499675No Hit
CATAGATTCAGAGAAGGACAGCGTGGTTGTCTATCCCGTCTACCTGGCCA1020.25498725063746813No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTAGCCCGTTCTCTCTGT1020.25498725063746813No Hit
CATAGATGGGACAGCGACAATGACAGCACATAGATGCCTGGCCAACTGTT990.2474876256187191No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGGTGGGTTGAGGGAGT990.2474876256187191No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTACGAATGAGGA980.24498775061246938No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGGCCATGCTGAAGTCCCAT970.24248787560621968No Hit
CATAGAACACGAAGATTTCAGATTAGCCTGAACACGAATGAGGAAACAGG920.22998850057497125No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAATGCTATGAAATAGCTTCAGAT920.22998850057497125No Hit
CATAGATTCAGAGAAGGACAGCGTGGTGGGTTGAGGGAGTCTTCTCTATG910.22748862556872157No Hit
CATAGACCCCATGACTCAGCTCCTCAATCCTGTGTTCATGGCTTCTATGT900.22498875056247186No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGTAAAGGCTGGGGTCTT900.22498875056247186No Hit
CATAGACCAGTACGCCTTACCCCTTGTCAGACCCAGGCTACACATCTATG880.2199890005499725No Hit
CATAGATTCTTTCCTGGCTGTGGGTGTGACTGTTAATATAGAAGAGACAC880.2199890005499725No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGTTATAGAAAACAAGG870.21748912554372282No Hit
CATAGATCTAGCCCATCACTTCAGCACTCTCCCACCATTCAGACTCTATG820.2049897505124744No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG780.19499025048747562No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT770.19249037548122594No Hit
CATAGAGCAGCTTGAATTCTCCTCAGACCATGGAGAGAATAATCCGTCTA750.18749062546872655No Hit
CATAGAATCTGGTTCAAGCACACAGTGGACAGTTGTGGAAAGTGCAATGA700.17499125043747812No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTGGTGC690.17249137543122844No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGACTGTTAATATAGAAGAGAC660.16499175041247938No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG660.16499175041247938No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC650.1624918754062297No Hit
CATAGACCAGTTACCACAAGAAGCAATGGGTCATTGTGAGGATTAAATGT640.15999200039998No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGCCATGCTGAAGTCCCA630.1574921253937303No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT610.15249237538123092No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG590.14749262536873156No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT580.14499275036248185No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGTCGTCAGTGTTGTT580.14499275036248185No Hit
CATAGACCCCATGACTCAGCTCCTCAGGTAGACCAACATGCTTTTAGTCA580.14499275036248185No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTATGAGCATGCCTTTGATAAAA550.1374931253437328No Hit
CATAGAACATTGATTCCTGGCATGTCCTACTTCCTTCTATGAGGCCTCTC540.13499325033748313No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC540.13499325033748313No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAGCATGGGTCATTGTGAGGATTAA520.12999350032498375No Hit
CATAGATGCCACCACACCCAGTTAATTTTTGTGATTTTAGTGGAGACAGT510.12749362531873407No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGCAGAGACTTGGTCTCATAG510.12749362531873407No Hit
CATAGAGCAAGCCCTCTAAGCCTATCACTCTCCCACCATTCAGACTCTAT500.12499375031248437No Hit
CATAGATGACATGGGAAATTATGCTGCTACCGTAACAGTTGTGGAAAGTG480.119994000299985No Hit
CATAGATGGTATTTGAGTGGGGAAACAGAGGAAACACGAATGAGGAAACA480.119994000299985No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTTACGGTAGCAGAGACTGTTAATA480.119994000299985No Hit
CATAGATTCCTCCAAAGACTGCAGGCCCTTCAGCATCATTTCTATGTGTA470.11749412529373532No Hit
CATAGATGGGACAGCGACAATGACAGGAATCAATGGTGGGTTGAGGGAGT450.11249437528123593No Hit
CATAGAACATTGATTCCTGGCATGTCCTACAGTTGTGGAAAGTGCAATGA450.11249437528123593No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG450.11249437528123593No Hit
CATAGATGGGACAGCGACAATGACAGACCCAGGCTACACATCTATGTGTA440.10999450027498625No Hit
CATAGAAGGAACAGCAGAGAGGGCAGCCCGTTCTCTCTGTTGTGTCTATG430.10749462526873656No Hit
CATAGATGCCACCACACCCAGTTAATTTTTTGTATTTTTAGTAGAGATGG410.1024948752562372No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)