FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807521

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807521
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences110999
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC99288.94422472274525No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA76236.867629438103045No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC74896.746907629798467No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA71266.419877656555465No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT40333.633366066360958No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA35923.2360651897764847No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA32942.967594302651375No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA30812.775700681988126No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT27692.4946170686222398No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA24612.217137091325147No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT22071.9883062009567651No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA18321.650465319507383No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC15911.43334624636258No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC13621.2270380814241568No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG13101.1801908125298426No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG12011.081991729655222No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG10050.9054135622843449No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA9880.8900981089919728No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA9710.8747826556996009No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT8980.8090162974441212No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG8140.7333399399994595No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA8080.7279344858962694No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA8030.7234299408102776No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT7860.7081144875179055No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC7630.6873935801223434No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT7600.6846908530707484No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA7500.6756817628987648No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT7230.6513572194344094No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC6810.6135190407120784No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA6680.6018072234884999No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA6270.5648699537833675No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG6250.5630681357489707No Hit
CATAGATCTGGGAGGTGAAGAGGACATCGGCCGCACTGAAATTGTCTATG5860.5279326840782349No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG5640.5081126856998711No Hit
CATAGACCCCCATGCAACCACATCTATACAATGGGCACACTTAACACCTC5530.4982026865106893No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCCAACTCTATAGATTATGCTCTCTT5040.45405814466796995No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG4960.44685087253038314No Hit
CATAGATCATGAATGACTCCCACTCTGAGGTTCTTCAACACAGCTATTCT4810.43333723727240786No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTGGTGAAAAGTAGGGGACAGTTCT4580.41261632987684577No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA4430.39910269461887043No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC4390.39549905855007705No Hit
CATAGAACCCTGCTTCCTAAATCAACAATGGGCACACTTAACACCTCTAT4390.39549905855007705No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA4280.38558905936089516No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA4120.3711745150857215No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA4070.36666996999972973No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTGATCTAGCTTCGGAATGT3920.3531563347417544No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG3850.34684997162136594No Hit
CATAGATGCACCAGAAGCCACCTACCCCTTTACCTACCTTCTCAGCTCTA3700.33333633636339066No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC3640.32793088226020056No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT3620.32612906422580384No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCATCGGCCGCACTGAAATTGTC3580.32252542815701046No Hit
CATAGAACCCTGCTTCCTAAATCAACAAGCACATTATTATTGGTTGGTTC3450.3108136109334318No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT3390.3054081568302417No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA3370.303606338795845No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA3340.30090361174424995No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTTAGGAGTTCTGGCCCCT3260.29369633960666314No Hit
CATAGAATTGCCTACTTTGGGACCCATCGGCCGCACTGAAATTGTCTATG3250.2927954305894648No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG3040.27387634122829935No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT3000.2702727051595059No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC2960.26666906909071253No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT2950.26576816007351417No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACAGCCCAGTTTTCCTTCTCT2820.25405634284993556No Hit
CATAGATTTGGCACTCACATACACGCATTTTGGGGGAAGAGAAACAGAAT2780.2504527067811422No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTAGGGCAAGTGTATGGTCA2750.24774997972954713No Hit
CATAGAATTCCCCAATGTCCTGTGCACCCGTAATCCCTCCCTTTTCTATG2630.2369390715231669No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA2590.2333354354543735No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGAGGATGACTTATGGAATCT2560.2306327084027784No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTAGAACAAGGGCATGGTCAAGTG2530.22792998135118334No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCAGAACAAGGGCATGGTCAAGTGT2410.2171190731448031No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCAAACAGAATGGGACCCATCTAT2310.20810998297281957No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGGTGAAAAGTAGGGGACAGTT2290.20630816493842288No Hit
CATAGATGCACCAGAAGCCACCTACCGTAAGGAAAATGTCAGTGGGCCAT2280.20540725592122452No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA2200.1981999837836377No Hit
CATAGAATCCCTGCCCTTGACCTTGGACACTGACGACAATGGGCACACTT2120.19099271164605086No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA2010.181082712456869No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC1920.1729745313020838No Hit
CATAGATGTGTGAGAGAGGGAGAGACAAGCACATTATTATTGGTTGGTTC1860.1675690771988937No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTCTCTTCCGCCTTTATCCTTCTAT1770.1594608960441085No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG1740.15675816899251346No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCACAGCCCAGTTTTCCTTCT1570.14144271570014144No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT1530.13783907963134803No Hit
CATAGATGCACCAGAAGCCACCTACCGTACTGGTGGTGCTGGAACTAGTT1460.13153271651095955No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA1440.12973089847656286No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA1440.12973089847656286No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA1430.1288299894593645No Hit
CATAGACCCCCATGCAACCACATCTATGTGTACAGCCTACATCCCTCATC1430.1288299894593645No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT1390.1252263533905711No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA1320.11891999027018262No Hit
CATAGATGTGTGAGAGAGGGAGAGACACCCGTAATCCCTCCCTTTTCTAT1320.11891999027018262No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTGTGATTGTCCTGGTCTATGA1300.11711817223578591No Hit
CATAGAATCCCTGCCCTTGACCTTGGGTCCATTTTTGGTTCTCTTCTATG1280.1153163542013892No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT1280.1153163542013892No Hit
CATAGACAGAACACCACACCCCTGTCTATCTTAGGAGTTCTGGCCCCTGT1280.1153163542013892No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCAGTGTGGTGAAAAGTAGGGGACAG1190.10720817304660402No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC1170.10540635501220731No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT1130.1018027189434139No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA1130.1018027189434139No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGTATATGACACATTACACCAG1110.1000009009090172No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)