FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807522

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807522
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences110999
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG102419.226209245128334No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT75996.846007621690285No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG74356.698258542869756No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT72026.48834674186254No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT39463.5549869818647015No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT35773.2225515545185095No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT32712.946873395255813No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT30922.7856106811773076No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT30092.7108352327498446No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT24282.1874070937576016No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT21861.9693871115956No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT17901.612627140785052No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG16041.4450580635861585No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG14531.3090208019892071No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG12971.168478995306264No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG12001.0810908206380236No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG10030.9036117442499482No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT9730.8765844737339976No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT9670.8711790196308075No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT8890.800908116289336No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG8140.7333399399994595No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT8070.727033576879071No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT8060.7261326678618727No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT7690.6927990342255336No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT7520.6774835809331615No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT7490.6747808538815665No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC7420.668474490761178No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT7140.6432490382796242No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC6710.6045099505400949No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG6270.5648699537833675No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT6250.5630681357489707No Hit
CATAGACAATTTCAGTGCGGCCGATGTCCTCTTCACCTCCCAGATCTATG5860.5279326840782349No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG5520.4973017774934909No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTATAGATGTGGTTGCATGGGGGTC5440.4900945053559041No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAACTTTCCCACCGCCCTTTT5000.4504545085991765No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG4910.44234632744439134No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA4750.4279317831692177No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGAGTGGGAGTCATTCATGATCT4710.4243281471004243No Hit
CATAGAACTGTCCCCTACTTTTCACCAGAACTTTCCCACCGCCCTTTTCT4620.41621996594563915No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG4380.3945981495328787No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT4350.3918954224812836No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC4280.38558905936089516No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTGATTTAGGAAGCAGGGTTCTAT4210.37928269624050664No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA4070.36666996999972973No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA4070.36666996999972973No Hit
CATAGATGAAAACATTCCGAAGCTAGATCACACTGCTCACGATGGTATTA4020.362165424913738No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC3790.34144451751817584No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTAGGTGGCTTCTGGTGCATCTA3620.32612906422580384No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT3500.3153181560194236No Hit
CATAGACAATTTCAGTGCGGCCGATGGGTAGAATCTTGAACTCAGGAGTC3480.3135163379850269No Hit
CATAGAACCAACCAATAATAATGTGCTTGTTGATTTAGGAAGCAGGGTTC3450.3108136109334318No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC3440.30991270191623344No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT3410.3072099748646384No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT3340.30090361174424995No Hit
CATAGACAATTTCAGTGCGGCCGATGGGTCCCAAAGTAGGCAATTCTATG3290.29639906665825816No Hit
CATAGACAGGGGCCAGAACTCCTAAGTACGGTTGCAGGATGAATGGGGAC3290.29639906665825816No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC3000.2702727051595059No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG2990.26937179614230755No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT2950.26576816007351417No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC2880.2594617969531257No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAATGCGTGTATGTGAGTGCCAAAT2850.25675906990153063No Hit
CATAGAACTGACCATACACTTGCCCTACACTGCTCACGATGGTATTACAT2800.2522545248155389No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGTAGAATCTTGAACTCAGGAGTCT2790.25135361579834054No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA2600.23423634447157182No Hit
CATAGAAAAGGGAGGGATTACGGGTGCACAGGACATTGGGGAATTCTATG2540.22883089036838167No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTCACTGCTCACGATGGTATTA2540.22883089036838167No Hit
CATAGACACTTGACCATGCCCTTGTTCTAGACACTTGAAAGCTCCCTGGA2490.22432634528238993No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTTAGGCTACTTGGGGGTCTCTAT2360.21261452805881134No Hit
CATAGAACTGTCCCCTACTTTTCACCATAGAACTTTCCCACCGCCCTTTT2330.2099118010072163No Hit
CATAGACACTTGACCATGCCCTTGTTCTGACACTTGAAAGCTCCCTGGAT2310.20810998297281957No Hit
CATAGATGGCCCACTGACATTTTCCTTACGGTAGGTGGCTTCTGGTGCAT2240.20180361985243112No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT2150.1936954386976459No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTCCAAGGTCAAGGGC2100.18919089361165417No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC2040.18378543950846404No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTCTCCCTCTCTCACACATC1930.17387544031928215No Hit
CATAGAACCTCAAGCCGGAAAACCTGTGTGTGTAAGTGGGTCTATGTGTA1930.17387544031928215No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCAGCTCCTCTTCTCTTCCCTCTAT1740.15675816899251346No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC1690.15225362390652167No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT1540.1387399886485464No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTACGGTAGGTGGCTTCTGGTGCAT1540.1387399886485464No Hit
CATAGATGAGGGATGTAGGCTGTACACATAGATGTGGTTGCATGGGGGTC1450.1306318074937612No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA1450.1306318074937612No Hit
CATAGAACTAGTTCCAGCACCACCAGTACGGTAGGTGGCTTCTGGTGCAT1440.12973089847656286No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT1440.12973089847656286No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT1420.12792908044216614No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG1410.12702817142496778No Hit
CATAGACCAGGACAATCACAGGGCAGGGCTGCATGGTGACTTTTCTATGT1340.12072180830457932No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC1290.11621726321858757No Hit
CATAGAAAAGGGAGGGATTACGGGTGTCTCTCCCTCTCTCACACATCTAT1290.11621726321858757No Hit
CATAGAAGAGAACCAAAAATGGACCCAAGGTCAAGGGCAGGGATTCTATG1280.1153163542013892No Hit
CATAGAACTGTCCCCTACTTTTCACCACACTGAACTTTCCCACCGCCCTT1270.11441544518419083No Hit
CATAGACAGGGGCCAGAACTCCTAAGATAGACAGGGGTGTGGTGTTCTGT1260.11351453616699249No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC1180.10630726402940567No Hit
CATAGATCTACTCCTACAATCTTGGCAAACTGACGAGCCGTTTCCCCCAT1130.1018027189434139No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT1110.1000009009090172No Hit
CATAGAAGAGAACCAAAAATGGACCCACCTAAACTCCTGAGATCCTCTAT1110.1000009009090172No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)