FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807525

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807525
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences122047
Sequences flagged as poor quality0
Sequence length150
%GC36

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA1373411.253041860922432No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG71185.832179406294297No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG63115.170958729014232No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC48163.946020795267397No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA47913.925536883331831No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG43873.5945168664530875No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA41893.4322842839234062No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG36823.016870549870132No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC29912.450695223971093No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT26442.1663785263054396No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA23411.918113513646382No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT22281.8255262316976246No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA17981.4732029464058927No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA16521.3535769007021885No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT16391.3429252664956943No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG15391.260989618753431No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC14771.210189517153228No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA13521.107769957475399No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG12411.0168213884814865No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG12381.0143633190492187No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA11170.9152211852810803No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC10970.8988340557326276No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT9460.7751112276418102No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT9430.7726531582095422No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA8920.7308659778609881No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTCTGGTGCATTACAGAGAG8720.7144788483125353No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA7990.6546658254606832No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT7360.6030463673830574No Hit
CATAGAAGCCATGAACACAGGATTGATAGGCTTAGAGGGCTTGCTCTATG7030.5760076036281105No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT7000.5735495341958426No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGGACCTAAGGCTGGTCTCAAA6710.5497881963505863No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC6110.5006268077052284No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG5800.4752267569051267No Hit
CATAGATGGCCAAGATACGAGCACATGACACTGCCCTCTCTGCTGTTCCT5650.46293640974378725No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGCCCTCTCTGCTGTTCC5630.461297696788942No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGACGCTATACCACACTA5140.421149229395233No Hit
CATAGATCACGTAGAAACTGGAGAGGCACACTGACGATCATTGTTCACTG5010.4104975951887388No Hit
CATAGACCAACATTTCTTCTCCCAGGGTAGCAGAGATCCCACCATTTGCC4950.405581456324203No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGACGATCATTGTTCACTGCA4910.40230403041451246No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG4860.3982072480273993No Hit
CATAGAAGCCATGAACACAGGATTGACACTGTCATTGTCGCTGTCCCATC4850.39738789154997667No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGATCATTGTTCACTGC4800.39329110916286353No Hit
CATAGACCAGCAGACACTCCCATCATTGCTTCTTGTGGTAACTGGTCTAT4730.3875556138209051No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4650.381000762001524No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT4510.3695297713176071No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGGAGACAGCCGCTCACC4470.3662523454079166No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGATCATTGTTCAC4380.35887813711111294No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGCAAGGGGTAAGGCGTACTG4120.3375748686981245No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT4070.33347808631101133No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTTGCTGAAGTGATGGGCTA3900.31954902619482656No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC3630.2974264013044155No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGACGCTATACCACACTAC3520.28841348005276657No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGCTATACCACACT3320.2720263505043139No Hit
CATAGACGGATTATTCTCTCCATGGTCTATGAGCAAGGGGTAAGGCGTAC3320.2720263505043139No Hit
CATAGATGTGTAGCCTGGGTCTGACACCGTACACCCACAGCCAGGAAAGA3250.2662908551623555No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGACATGCCAGGAATCAATGTT3240.26547149868493286No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGACACTGCCCTCTCTGCTGTT3070.25154243856874814No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG2970.24334887379452178No Hit
CATAGACACAACAGAGAGAACGGGCTACATTTCTTCTCCCAAGTATTAGA2800.22941981367833705No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT2710.22204560538153334No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGACGATCATTGTTCACTGC2630.2154907535621523No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTCTGAGGAGAATTCAAGCT2570.2105746146976165No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGGACATGCCAGGAATCAATGT2430.19910362401369966No Hit
CATAGAGAAGACTCCCTCAACCCACCACGCTGTCCTTCTCTGAATCTATG2300.18845198980720543No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGCCCTCTCTGCT2280.18681327685236016No Hit
CATAGACGGATTATTCTCTCCATGGTCTACAAAGGATTCTGGGCCATCTA2140.17534228616844333No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACCGTACCACGCTGTCCTTCTCT2140.17534228616844333No Hit
CATAGAGAAGACTCCCTCAACCCACCCACGCTGTCCTTCTCTGAATCTAT2090.17124550378133013No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGACGATCATTGT2070.1696067908264849No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCCACTGACGCTATACCAC2070.1696067908264849No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCACTGACGCTATACCACACTACA2060.16878743434906224No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGCTATACCACACTACA2050.16796807787163962No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACCACGCTATACCACACTACACA2040.167148721394217No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT2020.16551000843937172No Hit
CATAGAAATGATGCTGAAGGGCCTGCACACTGACGCTATACCACACTACA1960.16059386957483593No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT1930.15813580014256803No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA1900.15567773071030014No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGATCATTGTTCAC1870.15321966127803224No Hit
CATAGATGTTTTATCAAAGGCATGCTCATGTCATAGCAGCATAATTTCCC1840.15076159184576435No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACTCATCAGGAACCATGGGAGGT1790.14666480945865118No Hit
CATAGAAAAAACAGTTGGCCAGGCATGTCTGGCTCAGGTATGTCTTTATT1740.142568027071538No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGTCTGTTTCCCCACTCAAATACCA1700.1392906011618475No Hit
CATAGACCTCCGACAGTTTTTATGCACGATCATTGTTCACTGCAGCCTCT1650.13519381877473433No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA1630.13355510581988905No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC1620.13273574934246643No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTACCAGTTATTAGTTGAATGA1600.13109703638762116No Hit
CATAGACATTTAATCCTCACAATGACCCATGAGTGTCTGTTTCCCCACTC1580.1294583234327759No Hit
CATAGACCCAGATGCTGTCCCACTAACTGTCCCACGCTGTCCTTCTCTGA1570.12863896695535326No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTAGCAGCATAATTTCCCAT1540.12618089752308537No Hit
CATAGAAATGATGCTGAAGGGCCTGTGCTGAAGTGATGGGCTAGATCTAT1540.12618089752308537No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGTTCTACA1490.12208411513597221No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGAGTCCCAACTGTCTCT1490.12208411513597221No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1460.11962604570370432No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCCCAACTGTCTCTGAAAAATTT1440.11798733274885904No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACCGTAGTCCCAACTGTCTCTGA1420.11634861979401379No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG1410.11552926331659115No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT1390.11389055036174589No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT1380.11307119388432325No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAACACTGCCCTCTCTGCTGTTCCTT1380.11307119388432325No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG1330.1089744114972101No Hit
CATAGAAATGATGCTGAAGGGCCTGGAAATGATGCTGAAGTGATGGGCTA1320.10815505501978746No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT1260.10323891615525167No Hit
CATAGATCACGTAGAAACTGGAGAGGCTGGTGCATTACAGAGAGGAGATC1230.10078084672298378No Hit
CATAGAGAAGACTCCCTCAACCCACCATAGCAGCATAATTTCCCATGTCA1230.10078084672298378No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)