FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807526

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807526
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences122047
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT1355611.107196407941203No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG69295.677321032061419No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG58594.800609601219202No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG46913.843601235589568No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC46343.7968979163764778No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG42813.5076650798462885No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA40923.3528067056134114No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG36372.9799995083861135No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC29992.4572500757904745No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT25062.053307332421116No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA23351.9131973747818463No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT21271.7427712274779388No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA17371.4232222012831122No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT15691.28557031307611No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG15311.25443476693405No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC14811.2134669430629184No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG14751.2085508041983826No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT13431.100395749178595No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG12050.9873245552942719No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG11900.9750342081329324No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT10880.891459847435824No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC10520.8619630142486092No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT10280.842298458790466No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT9060.7423369685449048No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT8940.7325046908158332No Hit
CATAGATCTCCTCTCTGTAATGCACCAGACACTGACGAATGAGGAAACAG8680.7112014224028449No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT8540.6997304317189279No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT7400.6063237932927479No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT7020.5751882471506878No Hit
CATAGAGCAAGCCCTCTAAGCCTATCAATCCTGTGTTCATGGCTTCTATG6740.5522462657828542No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT6690.548149483395741No Hit
CATAGAGCAACCCCAGCAGTTTGAGAGGCCGAAGAGGGCCAATTGCTTGA6310.5170139372536809No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC5900.48342032167935306No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC5780.4735880439502815No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTCATGTGCTCGTATCTTGGCCA5530.45310413201471567No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGGGTCCTAAATGTCTTTGTCC5530.45310413201471567No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGCCTCTCCAGTTTCTA4970.40722016927904825No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGGGCTGGTGTTTTCCT4810.39411046564028607No Hit
CATAGATGGCAAATGGTGGGATCTCTGCTACCCTGGGAGAAGAAATGTTG4800.39329110916286353No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGGTCCTAAATGTCTTT4790.3924717526854409No Hit
CATAGATGGGACAGCGACAATGACAGTGTCAATCCTGTGTTCATGGCTTC4710.3859169008660598No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTAGCCCGTTCTCTCTGT4670.3826394749563693No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG4630.37936204904667875No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA4580.3752652666595656No Hit
CATAGACCAGTTACCACAAGAAGCAATGATGGGAGTGTCTGCTGGTCTAT4490.3678910583627619No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTACCCTGGGAGAAGAAATGTTGG4340.35560071120142245No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGAGCATGCCTTTGA4290.35150392881430925No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC4210.34494907699492816No Hit
CATAGACCAGTACGCCTTACCCCTTGCACTGTCATTGTGGGTTTTAACTA4090.3351167992658566No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT3910.3203683826722492No Hit
CATAGATCTAGCCCATCACTTCAGCAACACTGACGAATGAGGAAACAGGC3840.31463288733029077No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG3720.3048006096012192No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG3620.2966070448269929No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCAACATGCTTTTAGT3390.27776184584627234No Hit
CATAGACCAGTACGCCTTACCCCTTGCTCATAGACCATGGAGAGAATAAT3330.27284570698173655No Hit
CATAGATTCTTTCCTGGCTGTGGGTGTACGGTGTCAGACCCAGGCTACAC3170.2597360033429744No Hit
CATAGAACATTGATTCCTGGCATGTCCTTCCTTTCAATAGCCTTTTAGGT3160.2589166468655518No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGAGCATGCCTTTGAT3130.25645857743328393No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTCCTTCCTTTCAATAGCCTTTT3040.24908436913648022No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG2790.2286004572009144No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGAAGAAATGTAGCCCGTTCTC2640.21631011003957493No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGTAAAGGCTGGGGTCT2530.20729718878792597No Hit
CATAGAGCAGCTTGAATTCTCCTCAGACACTGACGAATGAGGAAACAGGC2500.20483911935565807No Hit
CATAGAACATTGATTCCTGGCATGTCCCTTCCTTTCAATAGCCTTTTAGG2330.19091005923947332No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGACTGTTAATATAGAAGAGAC2230.18271649446524701No Hit
CATAGATTCAGAGAAGGACAGCGTGGTGGGTTGAGGGAGTCTTCTCTATG2150.17616164264586592No Hit
CATAGATTCAGAGAAGGACAGCGTGGTACGGTAGCAGGCCCTTCAGCATC2060.16878743434906224No Hit
CATAGATGGCCCAGAATCCTTTGTAGACCATGGAGAGAATAATCCGTCTA2050.16796807787163962No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTGGGTTGAGGGAGTCTTCTCTAT2030.16632936491679434No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGACTGTTAATATAGAA2030.16632936491679434No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGGACTGTTAATATAGAAGA2000.16387129548452645No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGCAGGCCCTTCAGCATC1930.15813580014256803No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGTGGGTTGAGGGAGTC1890.1548583742328775No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTGGTAGCAGGCCCTTCAGCATCAT1870.15321966127803224No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGCATTAGGAAGTCTTCTCA1870.15321966127803224No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA1840.15076159184576435No Hit
CATAGATGACATGGGAAATTATGCTGCTATGACATGAGCATGCCTTTGAT1800.1474841659360738No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACAGTTGTGGAAAGTG1780.14584545298122856No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG1760.14420674002638328No Hit
CATAGACCTCCCATGGTTCCTGATGAGTAGCAGGCCCTTCAGCATCATTT1730.1417486705941154No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACGAATGAGGAAACAGGCAC1690.13847124468442487No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGACATGCCTGGCCAACTGTT1680.13765188820700222No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA1660.13601317525215695No Hit
CATAGAGGCTGCAGTGAACAATGATCGTGCATAAAAACTGTCGGAGGTCT1650.13519381877473433No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC1590.13027767991019853No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCATGGGTCATTGTGAGG1530.12536154104566272No Hit
CATAGATCTAGCCCATCACTTCAGCACAGGCCCTTCAGCATCATTTCTAT1530.12536154104566272No Hit
CATAGATGACATGGGAAATTATGCTGCTACACTGTCATTGTGGGTTTTAA1490.12208411513597221No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCTGGGAGAAGAAATGTT1480.12126475865854958No Hit
CATAGATTCAGAGAAGGACAGCGTGGGACAGTTAGTGGGACAGCATCTGG1440.11798733274885904No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1420.11634861979401379No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTTTGGAGGCTGGAGAAAAAGCT1400.11470990683916853No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACTCAGAGACAGTTGTGGAAAGT1370.11225183740690062No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACCCTGGGAGAAGAAATGTTGGT1350.11061312445205536No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG1330.1089744114972101No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG1320.10815505501978746No Hit
CATAGATCTCCTCTCTGTAATGCACCAGCCTCTCCAGTTTCTACGTGATC1270.10405827263267431No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG1260.10323891615525167No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCCAGGCCCTTCAGCATCA1260.10323891615525167No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)