FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807532

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807532
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences213924
Sequences flagged as poor quality0
Sequence length150
%GC39

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA4327120.22727697687029No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT171458.014528524148764No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG125215.853013219648099No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG91384.271610478487687No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA71513.3427759391185656No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA68613.207213776855332No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT64293.005272900656308No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG61722.8851367775471664No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG59872.798657467137862No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT53292.4910715955199043No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT44942.1007460593481797No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT44652.0871898431218563No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT43962.0549353976178457No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG40961.9146986780351902No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA31461.4706157326901144No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT29911.3981600942390755No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT27431.2822310727174138No Hit
CATAGATCAAGGTGTGAGCATGGTCCTCCGATGCTTATTACATTGTTCTA19930.9316392737607749No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC19730.9222901591219311No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACACTATGGCTTAATGTTTCT16850.7876629083225818No Hit
CATAGATGTTGTTGTTCTGCTGCTCACTCTTTGGGTTCTATGTGTAGAAC14840.6937043062022027No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA14380.6722013425328621No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG14320.669396608141209No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATTTATCGGGAGCCACAGA12970.606290084329014No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT10720.5011125446420224No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG9800.4581066173033414No Hit
CATAGACGGGAAGAGTAAGACCACCCTACGGTAGCAGAAGCTTTGAGATT8990.4202427030160244No Hit
CATAGATAGCAGCAATCTCAGGCCTCCTCATAGAGGCAAGGGTACTATTT8860.414165778500776No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGGGTAATTCTGGCCTTGTTCTAT8250.3856509788523027No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAAGCTTTGAGAT8090.37817168714122773No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC8040.37583440848151684No Hit
CATAGATCTCAAACAGCCTCTCCCAGTATTAGAAGCTTTGAGATTTGTGT7950.3716273068940371No Hit
CATAGAGCCATCATCATTTCTCACCCAGGTAAACAAACTTCTGGCCCTCT7040.3290888352872983No Hit
CATAGACGGGAAGAGTAAGACCACCCAATTACCTTTCACGTAAGCAGATG7010.3276864680914717No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC6370.2977693012471719No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG5890.275331426113947No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACGTGGTGTTTGGG5200.24307698060993624No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG4010.1874497485088162No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATAATCTGTGACACCGAAAAAC3910.18277519118939436No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTCTATGTGTAGAACCATGTCGTC3860.18043791252968344No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA3830.1790355453338569No Hit
CATAGATCCAGCTTCATCCATGTCCCATTGTCGCCTTCTCTTCTCTATGT3790.17716572240608813No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTCTATCAGGAAAGTTGGAACCTA3760.17576335521026157No Hit
CATAGATCCAGCTTCATCCATGTCCCTCCTCTTCTTCCTCCTCCTGTCTA3660.17108879789083975No Hit
CATAGATCCCTGGCAAGAATTCCTCAATATGAACAGAAAGAAGCTCTATG3510.16407696191170698No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG3490.1631420504478226No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACCCCATATCTACC3240.15145565714926795No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTACCAAAAGCACAAGGGAGA3140.1467810998298461No Hit
CATAGAGCCATCATCATTTCTCACCCAGTATTTCATTATAGGTAAACAAA3040.14210654251042426No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTCCAGAGGCAAGGGTACTATTTT2900.13556216226323367No Hit
CATAGATCCCTGGCAAGAATTCCCCAATATGAACAGAAAGAAGCTCTATG2890.1350947065312915No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACTCTAGCCTGGGAGACATCT2840.13275742787158057No Hit
CATAGATAGCAGCAATCTCAGGCCTCCTCTTCTTCCTCCTCCTGTCTATG2840.13275742787158057No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG2620.12247340176885248No Hit
CATAGAGGTGAGCGGCTGTCTCCACTATGGCTTAATGTTTCTCTTTTGCT2510.11733138871748847No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTTGAAACATTTTCTG2410.1126568313980666No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTAGTACATTTATCGGGAGCC2410.1126568313980666No Hit
CATAGAACAATCAGGCACCCACCATGGTGGGAGTATACTGATAGCTCTAT2400.11218937566612441No Hit
CATAGAACAATCAGGCACCCACCATGTCACTGTGTGCTCAGATGACCTCT2360.11031955273835567No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA2300.10751481834670255No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTTACGTGGTGTTTGG2280.1065799068828182No Hit
CATAGAACAATCAGGCACCCACCATGTGTAGAACCAGGAGGCTGAAACTC2180.10190534956339634No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)