FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807534

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807534
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39107
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2076053.085125425115706No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA23175.924770501444754No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG8352.135167617050656No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG6621.6927915718413584No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT4291.096990308640397No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC4041.0330631344772034No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG2850.7287697854604035No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG2390.6111437850001279No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG2390.6111437850001279No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTACGGTAGCAAAGCTG2310.590687089267906No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC1970.5037461324059631No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTATGTGTAGAACCAT1660.4244764364436034No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG1500.3835630449791597No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGG1280.32730713171554965No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA1230.314521696882911No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCCGCCTCCCAAAGTGCTGGG1080.27616539238499505No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1020.2608228705858286No Hit
CATAGAGTGGGGGACTAGCATTGATTCTATGTGTAGAACCATGTCGTCAG930.23780908788707902No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT930.23780908788707902No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA920.2352520009205513No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG900.23013782698749585No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA880.22502365305444036No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG850.2173523921548572No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA830.2122382182218017No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC810.20712404428874626No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA790.20200987035569082No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA790.20200987035569082No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA760.1943386094561076No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA760.1943386094561076No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA740.18922443552305213No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT730.18666734855652442No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA720.18411026158999666No Hit
CATAGAGGCTGGGTGACTTGGTGAATACTTGGTCTCATAGAGGGGAGACA690.1764390006904135No Hit
CATAGATGACCTGTTAATCTGCCCCCGTAACCAGTGTAGCAGACCATCTT680.17388191372388573No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT670.17132482675735802No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT650.16621065282430256No Hit
CATAGATACGATCATAAGGGTGGGGCACAAAGTTCTATGTGTAGAACCAT640.16365356585777482No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT620.15853939192471936No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA580.14831104405860843No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA560.14319687012555296No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACACTGGGGGCACAAAGTT550.14063978315902523No Hit
CATAGATGTGAGCACTACTGATAATCCCTCATTACTCTGGTTCTATGTGT530.13552560922596976No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTGGCCTCAGTTTCCCCTCCTTCTA530.13552560922596976No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA530.13552560922596976No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGATTACAACCCCCTCATAGATT520.13296852225944206No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCACAGAGCCTTCAGGTCA510.1304114352929143No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG490.12529726135985886No Hit
CATAGAGGTGAGCGGCTGCCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA480.12274017439333111No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGTAGCAGAGACTTGGTCTCATA470.12018308742680339No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTGGCATGGAGAAGGGTC470.12018308742680339No Hit
CATAGATGATGTGAAAAGGACCCATGGCTCTATGTGACCTCTCTCATAGC470.12018308742680339No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG430.10995473956069246No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA400.10228347866110928No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGG400.10228347866110928No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)