FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807536

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807536
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33205
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1639449.372082517693116No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA14334.3156151182050895No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG6872.0689655172413794No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG5851.761782864026502No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT4561.373287155548863No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTATGTGTAGAACCAT4411.32811323595844No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT3871.1654871254329169No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC3711.117301611203132No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG2690.8101189579882548No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG2480.7468754705616625No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATGTCGTCAGTGTAC1810.5450986297244391No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG1200.36139135672338507No Hit
CATAGATGACCTGTTAATCTGCCCCCAGATCACAGAGTGGCCTTGGGCAA1190.3583797620840235No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA990.29814786929679266No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT910.2740551121819003No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG890.26803192290317723No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC860.25899713898509263No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA860.25899713898509263No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTGGCATGGAGAAGGGTC860.25899713898509263No Hit
CATAGACCAAACACAGAAGACATGGCAGCATTTAATCTATGTGTAGAACC850.25598554434573106No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA840.25297394970636955No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG820.24695076042764644No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA770.23189278723083873No Hit
CATAGACCAAACACAGAAGACATGGCATATACCAGTGTAGCAGACCATCT770.23189278723083873No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCCGCCTCCCAAAGTGCTGGG770.23189278723083873No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA770.23189278723083873No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAGAGAAAACTACCCCAGGCTC740.2228580033127541No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT730.21984640867339253No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTTAGGTCA720.21683481403403101No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTACGGTAGCAAAGCTG710.2138232193946695No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA710.2138232193946695No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGGCAAAG670.20177684083722333No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT670.20177684083722333No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA640.19274205691913868No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTCATAGAGGGGAGACACTG640.19274205691913868No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA640.19274205691913868No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTGGCAAAGCTGCT630.18973046227977716No Hit
CATAGACCAAACACAGAAGACATGGCATATACAAGGTGTCTAAGAAATAC620.18671886764041562No Hit
CATAGATGTGAGCACTACTGATAATCCCTCATTACTCTGGTTCTATGTGT610.18370727300105408No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC590.17768408372233097No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGACTCTA580.17467248908296942No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA570.17166089444360788No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA550.1656377051648848No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCAGAGACTTGGCCTCAGTTTCCCC540.16262611052552325No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA540.16262611052552325No Hit
CATAGACTGGCGGTGATTGCTTTCCTACTTGGCCTCAGTTTCCCCTCCTT500.15057973196807709No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA490.14756813732871554No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA490.14756813732871554No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT490.14756813732871554No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCAAAGCTGCT490.14756813732871554No Hit
CATAGATTAGGGGTGACGGACTAGCCTACTTGGCCTCAGTTTCCCCTCCT470.14154494804999246No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGG470.14154494804999246No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA460.13853335341063092No Hit
CATAGATGTGAGCACTACTGATAATCCCTAGAGACTTGGTCTCATAGATG460.13853335341063092No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTACACTGATGTGGCATGGA460.13853335341063092No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCAGCCTCCCAGATTGCTGGG450.1355217587712694No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA450.1355217587712694No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGG430.12949856949254632No Hit
CATAGACACACCCAACTCTGCTCAGTGTACCAGTGTAGCAGACCATCTTC420.12648697485318477No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTCAGTTTCCCCTCCTTCTATGT400.12046378557446168No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACTTGGTCTCATAGAGGGG390.11745219093510013No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTAGCTGGGCATGGTA390.11745219093510013No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA380.11444059629573859No Hit
CATAGACTGGCGGTGATTGCTTTCCTCTAGTGGGAAAGCTGTCTGTGTAG370.11142900165637705No Hit
CATAGACTGGCGGTGATTGCTTTCCTGATGTTTTAAAATGAGCACCTAAC370.11142900165637705No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT360.10841740701701551No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGATTACAAGGGGAAGTAGGGAA350.10540581237765397No Hit
CATAGAAAGGCAATGTTCAAGTGGTTTTCATGAATGTTGGAGAGGCACAT350.10540581237765397No Hit
CATAGAGGTGAGTGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA350.10540581237765397No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC340.10239421773829242No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTACGGTAGCAGAGACTCAG340.10239421773829242No Hit
CATAGATGACCTGTTAATCTGCCCCCGTACTTCAGAACGCGGCAAATGGT340.10239421773829242No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)