FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807538

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807538
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences130879
Sequences flagged as poor quality0
Sequence length150
%GC40

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1800213.754689445976817No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT51253.9158306527403175No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG45623.4856623293270883No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA37552.86906226361754No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG37212.8430840700188726No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA37092.833915295807578No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA32942.516828521000313No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT30872.358667165855485No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT26592.031647552319318No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT24101.841395487434959No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG19571.4952742609585952No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT15181.159849937728742No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA13301.0162058084184629No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG13030.9955760664430504No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA12800.9780025825380696No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA12570.9604290986330887No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT11710.894719550118812No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA11610.8870789049427334No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT11050.8442912919566928No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC11000.8404709693686535No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT10440.7976833563826129No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA10070.7694129692311219No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA8210.6272969689560587No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA7510.573812452723508No Hit
CATAGAGCCCCCAGAGAAGAATGACCGCCCCCAGGTAGCAAAACAGAGTC7140.5455420655720169No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT6950.5310248397374674No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT6920.5287326461846438No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG6370.4867090977162112No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC6280.4798325170577404No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG6100.4660793557407988No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC6040.46149496863515155No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT5960.45538245249428855No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT5960.45538245249428855No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTAGCATTCTCTCAGGGCTGT5780.44162929117734706No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC5580.42634800082518964No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT5180.39578542012087503No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA5080.3881447749447963No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTGGGAAAGGTATGTG4630.35376187165244233No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGAGAAGTGTATTAATTATC4580.349941549064403No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC4340.33160400064181417No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCAGCATTCTCTCAGGGCTGTT4310.32931180708899055No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG4200.32090709739530404No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTCTGTTTACTCGGAGATT4110.31403051673683324No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGCTTACACTGCAC3950.3018054844551074No Hit
CATAGACCACACACACAACTGAGAGTACATAGACCTTTTTCTGTAGTCAA3730.2849960650677343No Hit
CATAGACCCCCTTGAGTTCACTGGACTACGGCAACATATCAGAAGCATCT3640.2781194844092635No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG3590.2742991618212242No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC3340.2551975488810275No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA3280.2506131617753803No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC3160.2414443875640859No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATAGAGCAGCATTCTCTCAGGG3140.2399162585288702No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC3140.2399162585288702No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCACTATTCTCTGGCCCGTCTAT2990.22845529076475218No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGACGGCAACATATCAGAAG2930.22387090365910498No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG2880.22005058107106562No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATAGCTT2760.21088180685977123No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACAATGCCTCACACACAGGTCTAT2750.21011774234216338No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA2590.19789271006043752No Hit
CATAGAAGTACCATCAGAGTGAACAGGCCTAACCTCCCACCCCAGCTGTC2560.19560051650761393No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA2510.19178019391957457No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATTCTACGGCAACATATCAGA2340.17879109712024083No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTATGAAGCAGAGGTAGATGGATCA2310.17649890356741724No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT2270.17344264549698576No Hit
CATAGACCATCCCTTCTACAAGAGGCAGTGTAGACCTTTTTCTGTAGTCA2240.17115045194416217No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA2200.1680941938737307No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT2120.16198167773286776No Hit
CATAGAGGCACGATCTTGTTTCACTGTTGGTCTCATAGGGCACTGAGACC2100.16045354869765202No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGGCAT2070.15816135514482843No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATGTGTAGAACCATGT2070.15816135514482843No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT2050.1566332261096127No Hit
CATAGAGTCCTTCCCTCTCACACATGTTACGGCAACATATCAGAAGCATC2040.15586916159200484No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT2030.15510509707439696No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTCCCCAGGTAGCAAAACA2020.1543410325567891No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAATCTTTGGGAGGCTATTAG1990.1520488390039655No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT1970.15052070996874975No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT1930.1474644518983183No Hit
CATAGACCATCCCTTCTACAAGAGGCAGAGTCCATCCAGTCCAGCTCCTT1920.14670038738071042No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTACAGGGCAGAGAGTGTGTT1890.14440819382788683No Hit
CATAGATCCCATACTCCTCCATTACCCTAACCTCCCACCCCAGCTGTCTA1860.14211600027506321No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGCAGAGAGTGTGTTGTATT1840.1405878712398475No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAATGGCTTCCA1810.1382956776870239No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA1800.13753161316941603No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCACGGCAACATATCAGAAGCATC1800.13753161316941603No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGTAGAGAGTTCTG1780.1360034841342003No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTAGAAGGAATCTTTGGG1780.1360034841342003No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1770.13523941961659242No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT1770.13523941961659242No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA1770.13523941961659242No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGGTGAGGAGGAGCTGAC1670.12759877444051376No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTAGCCAAATTCCTTACCGATCTA1660.1268347099229059No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGTGTAGAACAGGAAACATT1650.12607064540529803No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1620.12377845185247442No Hit
CATAGACCACACACACAACTGAGAGTGTGTTGCAGGGCAGAGAGTGTGTT1600.1222503228172587No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA1580.12072219378204295No Hit
CATAGAGCCCCCAGAGAAGAATGACCACACTGACCACACGGAAGACACAG1560.11919406474682721No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGCAGCATTCTCTCAGGGCTGTTCT1520.11613780667639574No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1490.11384561312357214No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGCTACGGCAACATATCAGA1480.1130815486059643No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAGGGCAGAGAGTGTGTTG1480.1130815486059643No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1470.11231748408835641No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG1470.11231748408835641No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCTACGATAGCGAGAAGAGTGGAGG1450.11078935505314069No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT1440.11002529053553281No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGTGCCCGGCTTCCTTGGGACA1410.10773309698270922No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAGGGCAGAGAGTGTGTTGTATTCT1390.10620496794749348No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGGGGTAGACTCTGTTTACT1370.10467683891227776No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGAAGCAGAGGTAGATGGATCA1360.1039127743946699No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTGGGTAGAGAGTTCTGTAGA1340.10238464535945416No Hit
CATAGATGAGTGTCCTTGTAGATGTGCATTCTCTCAGGGCTGTTCTCTAT1310.10009245180663057No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGGCAGAGAGTGTGTTGTATTCT1310.10009245180663057No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)