FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807541

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807541
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences152008
Sequences flagged as poor quality0
Sequence length150
%GC37

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC91626.027314351876218No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA71044.673438240092627No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA70404.631335192884585No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC63384.169517393821378No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA45202.9735277090679437No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA41962.7603810325772327No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT41582.735382348297458No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA38482.5314457133835058No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG31972.103178780064207No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT23671.5571548865849165No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG20991.380848376401242No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA19591.288747960633651No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA19591.288747960633651No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA17001.118362191463607No Hit
CATAGACCCACTTACACACACAGGTTTGGGGGAAGAGAAACAGAATCTAT16891.111125730224725No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG16621.0933635071838324No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC16051.0558654807641703No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT15941.0486290195252883No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC15441.0157360138940057No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG14830.9756065470238409No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC13220.8696910688911109No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA12730.8374559233724541No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT12450.8190358402189358No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT12060.7933792958265354No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC11480.7552234092942476No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG10740.7065417609599495No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAACAAGGGCATGGTCAAGTGT10210.67167517499079No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA9570.6295721277827483No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGTATATGACACATTACACCAG9150.6019420030524709No Hit
CATAGATCTGGGAGGTGAAGAGGACAAGCACATTATTATTGGTTGGTTCT9110.5993105626019684No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA8730.5743118783221935No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG8610.5664175569706857No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT8600.5657596968580602No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT8530.5611546760696805No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA6960.4578706383874533No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG6890.4532656175990737No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTCTCTTCCGCCTTTATCCTTCT6600.4341876743329299No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA6160.40524182937740116No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT6140.40392610915214994No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT5990.3940582074627651No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT5830.38353244566075473No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGATGACTTATGGAATCTGA5550.36511236250723644No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG5530.36379664228198516No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGTGTACAGCCTACATCCCT5490.3611652018314826No Hit
CATAGAGCAGTGCAGCAGAAGATAGCTCTCTTCCGCCTTTATCCTTCTAT5460.3591916214936056No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC5410.35590232093047736No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC5370.35327088047997474No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA5320.3499815799168465No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGTCTACAATGGGCACACTTAA5220.34340297879058995No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC4950.32564075574969736No Hit
CATAGATTTGGCACTCACATACACGCCATGGTTCCAACTCTATAGATTAT4910.3230093152991948No Hit
CATAGATGGCATGTCACTTCCTCAGATCTATGTGTAGGAATTAGAGCCAG4900.32235145518656916No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTGGTGGTGCTGGAACTAGTTCT4850.31906215462344084No Hit
CATAGACAGAACACCACACCCCTGTCGAAGATTCCAACTCTATAGATTAT4810.3164307141729382No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG4770.31379927372243566No Hit
CATAGAAAAGTCACCATGCAGCCCTGGATCTATGGAACAAGGGCATGGTC4750.3124835534971844No Hit
CATAGATGGCATGTCACTTCCTCAGAACAAGGGCATGGTCAAGTGTCTAT4710.30985211304668175No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCCACAAAAGACGGAACAAGGGC4700.30919425293405606No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA4620.3039313720330509No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT4540.2986684911320457No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA4530.29801063101942005No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGGTGAAAAGTAGGGGACAGTT4520.2973527709067944No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGGAATTAGAGCCAGTTCTGAGT4500.29603705068154307No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA4430.2914320298931635No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA4230.2782748276406505No Hit
CATAGAATCCCTGCCCTTGACCTTGGTCTGTCATAAAACAATGGGCACAC4110.2703805062891427No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA4080.26840692595126575No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCCAGCATGAGAAGAATGGCCTCTA4020.2644597652755118No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTGGGGGAAGAGAAACAGAATC4010.26380190516288615No Hit
CATAGAACCCTGCTTCCTAAATCAACAATGGGCACACTTAACACCTCTAT4000.2631440450502605No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCACACTGACGACAAGGTTTTCC3990.26248618493763487No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA3980.26182832482500923No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGTGGTGCTGGAACTAGTTCTAT3850.2532761433608757No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGAATTAGAGCCAGTTCTG3820.2513025630229988No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAAGTATATGACACATTACACC3780.24867112257249616No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTCAGACCACAATGGGCACACT3770.24801326245987051No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACAGCCCAGTTTTCCTTCTCT3760.2473554023472449No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTAGAACAAGGGCATGGTCAAGTG3750.24669754223461926No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC3740.2460396821219936No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG3710.24406610178411664No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT3610.23748750065786012No Hit
CATAGACAGTCCTGCCGTGTACATGTACAAACCAAACAATAGCCAGTCTA3600.23682964054523448No Hit
CATAGATCATGGGACTTCAGCATGGCTCTCTTCCGCCTTTATCCTTCTAT3580.23551392031998317No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGAACAAGGGCATGGTCAAGTGT3390.2230145781800958No Hit
CATAGAATCCCTGCCCTTGACCTTGGCATAGAAGGGCAAGTGTATGGTCA3380.22235671806747015No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT3370.22169885795484448No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC3360.22104099784221884No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG3280.21577811694121363No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCAAGTATATGACACATTA3270.21512025682858799No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA3260.21446239671596232No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCTGGCAAAAGGGTAAGAG3240.213146676490711No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3110.20459449502657753No Hit
CATAGACAGAACACCACACCCCTGTCTCTTAGGAGTTCTGGCCCCTGTCT3110.20459449502657753No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA3090.20327877480132622No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTTAGGAGTTCTGGCCCCT3070.20196305457607497No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC3060.2013051944634493No Hit
CATAGAATTGCCTACTTTGGGACCCATCGGCCGCACTGAAATTGTCTATG3060.2013051944634493No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGGGAGATGGGAGGAACAGGGAGA3030.19933161412557235No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT3000.19735803378769537No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATGTCGTCTGATCTAGCTTCGGA2990.19670017367506973No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT2860.18814799221093628No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAGTGTAGTCACTCAAATATAG2860.18814799221093628No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT2850.1874901320983106No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA2820.18551655176043366No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT2740.18025367085942845No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC2640.17367506973317193No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA2640.17367506973317193No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGAATTAGAGCCAGTTCTGA2630.1730172096205463No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT2520.16578074838166412No Hit
CATAGATGGCATGTCACTTCCTCAGACACTGACGACATGGTTCTACACAT2470.16249144781853586No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTACTTAGGAGTTCTGGCCC2300.1513078259038998No Hit
CATAGAGCACCCAACTATCCTTCAGCAACATAGATGTCCCCCTTCATTTT2180.14341350455239196No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA2160.14209778432714068No Hit
CATAGACCATGTAATACCATCGTGAGCAGAGATCACGCCATTGCACTCCA2140.14078206410188937No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGTCCATTTTTGGTTCTCTTCTAT2140.14078206410188937No Hit
CATAGACCCCCATGCAACCACATCTATGAGACCAAGTGGGAGGAACAGGG2120.13946634387663806No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGACCAAGTCTCAGGGCAAG2100.13815062365138678No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGAAAAGTAGGGGACAGTTCTAT2060.13551918320088416No Hit
CATAGACCATGTAATACCATCGTGAGCAGAGATCATGCCATTGCACTCCA2050.13486132308825852No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTTGGGGGAAGAGAAACAGAAT2000.13157202252513026No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGAGGTTCTTCAACACAGCTATTC1990.13091416241250461No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTCATCGGCCGCACTGAAA1970.1295984421872533No Hit
CATAGAGCACCCAACTATCCTTCAGCAGACTTGTCCTTGCACACCATGGA1970.1295984421872533No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACTGCAAACAGAATGG1970.1295984421872533No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATGGGAGGAACAGGGAGATG1970.1295984421872533No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA1940.12762486184937635No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGGAACAAGGGCA1930.1269670017367507No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCACACTGACGACATGGTTCCAACTC1910.1256512815114994No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGAACAAGGGCATGGTCAAG1910.1256512815114994No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCACTTGATCATCCATTGTCTGCT1890.12433556128624808No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA1880.12367770117362245No Hit
CATAGAATTGCCTACTTTGGGACCCACAGCCCAGTTTTCCTTCTCTATGA1870.1230198410609968No Hit
CATAGAATCCCTGCCCTTGACCTTGGACAATGGGCACACTTAACACCTCT1800.11841482027261724No Hit
CATAGATGCACCAGAAGCCACCTACCTCCCCTTTACCTACCTTCTCAGCT1760.11578337982211463No Hit
CATAGACCCCCATGCAACCACATCTATGGGAGGAACAGGGAGATGTTCTA1740.11446765959686332No Hit
CATAGATTTGGCACTCACATACACGCCCTTTTGCCAAGATTGTAGGAGTA1670.10986263880848376No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTATGAGACCAAGT1580.10394189779485291No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCGACATGGTTCTACACATAGGAAAA1570.10328403768222726No Hit
CATAGAGAAAGGCAGGCGAAGTTAGCTCTCTTCCGCCTTTATCCTTCTAT1570.10328403768222726No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGCAAAAGGGTAAGAGTTCTATG1550.10196831745697595No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTAAGGGCAAGTGTATGGTCAGTTC1540.10131045734435029No Hit
CATAGAGGGAAGAGAAGAGGAGCTGGTGGTGCTGGAACTAGTTCTATGAG1530.10065259723172465No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)