FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807544

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807544
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences344433
Sequences flagged as poor quality0
Sequence length150
%GC43

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA8039023.33980774199917No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT280138.133076679644518No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG204795.9457136801642125No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA128593.7333821091474975No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG99992.9030319394483106No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAATCTATGTGTA97192.8217389158413972No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG70782.0549715038919034No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT68982.002711703001745No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT50411.4635647571516086No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG47621.382562065771863No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA47571.381110404636025No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG42521.2344926299164134No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG42141.2234600052840465No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG40931.1883298057967733No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATTTATCGGGAGCCACAGA31120.9035138909454088No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG31030.9009009009009009No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA29960.8698353525939734No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT23820.6915713651130989No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA22720.6596348201246687No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG20290.5890840889229545No Hit
CATAGATGTTGTTGTTCTGTTGCCCAAGTCGTCAGTGTAGAAGCTTTGAG19310.5606315306605348No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT17880.5191140221755755No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA17840.5179526932669053No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATTGTCGCCTTCTCTTCTCTAT17560.509823390906214No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG16980.4929841217304962No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT15960.4633702345594063No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT15480.4494342876553641No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC15230.4421759819761753No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG13940.4047231246715617No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC13290.38585152990567106No Hit
CATAGATGAAAGAGCATTGGTTGTAACACTATGGCTTAATGTTTCTCTTT13020.37801255977214726No Hit
CATAGACAAGCCTGCCAAGACCTCTCTCTATAGAGAAGCTTTGAGATTTG11920.346076014783717No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAAACATTTTCTGGTCAGCTGT11670.33881770910452835No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACTATGGCTTAATG11550.3353337223785178No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG10860.31530079870395694No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC10130.29410654612072595No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA9660.2804609314438512No Hit
CATAGATCAAGGTGTGAGCATGGTCCTCTTCTTCCTCCTCCTGTCTATGT9620.279299602535181No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAACCTGTGTATATT9040.2624603333594632No Hit
CATAGATCTCAAACAGCCTCTCCCAGACACTGCTGCTCACTCTTTGGGTT8600.24968571536409112No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGC7350.21339418696814766No Hit
CATAGATCTAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT7140.20729721019762914No Hit
CATAGATCCCTGGCAAGAATTCCTCAATATGAACAGAAAGAAGCTCTATG7130.2070068779704616No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACCCCATATCTACC7110.2064262135161265No Hit
CATAGATCCAGCTTCATCCATGTCCCTACAAAGGACATAAACTCATCATT6660.19336126329358685No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACTGCT6340.18407063202422533No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGCTGCTGCTCACT6180.17942531638954456No Hit
CATAGACACAACGTTTGAGACTGCCTGGGAGACCCCATATCTACCAAAGA5730.16636036616700492No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC5630.16345704389532942No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTACTGCTGCTCACTCT5630.16345704389532942No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCCTGCTGCTCACTCTTT5410.15706973489764336No Hit
CATAGAAAGGGACAAGGGCTCACTCTTCTGCTGCTCACTCTTTGGGTTCT5400.15677940267047583No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCTGC5160.14981142921845467No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGCTGCTGCTCA5140.1492307647641196No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGACCCCATATCTA5120.14865010030978448No Hit
CATAGATCCCTGGCAAGAATTCCCCAATATGAACAGAAAGAAGCTCTATG4960.14400478467510372No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGGTAAACAAACTT4930.14313378799360107No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCCGTGGTGTGCAAATTCT4520.1312301666797316No Hit
CATAGACACAACGTTTGAGACTGCCTGCTGCTCACTCTTTGGGTTCTATG4480.13006883777106143No Hit
CATAGATCCAGCTTCATCCATGTCCCATTGTCGCCTTCTCTTCTCTATGT4420.12832684440805614No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTCTGCTGCTCACTCTTTGG4250.12339119654620782No Hit
CATAGATCCAGCTTCATCCATGTCCCTCCTCTTCTTCCTCCTCCTGTCTA4090.11874588091152706No Hit
CATAGATGTTGTTGTTCTGCTGCTCACTCTTTGGGTTCTATGTGTAGAAC4010.11642322309418668No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA3930.11410056527684631No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA3930.11410056527684631No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACACCAAAAGCACAAGGGAGA3870.11235857191384102No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCATGTCA3810.11061657855083573No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA3740.10858425296066287No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)