FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807545

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807545
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences123007
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4368935.517490874503075No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC32082.607981659580349No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC29502.3982374986789368No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC24531.9941954522913328No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT20591.6738884778915022No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA19341.572268244896632No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT19291.568203435576837No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA19111.5535701220255758No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA16271.3226889526612307No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA11880.9657986943832466No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA11800.9592949994715747No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG11570.9405968766005187No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA11230.912956173225914No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG11190.9097043257700782No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA8890.722723097059517No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT8330.6771972326778151No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG8040.6536213386230052No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA7640.6211028640646468No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA7540.612973245425057No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA7070.5747640378189859No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG6720.5463103725804223No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACTTGTG6530.530864097165202No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT5990.48696415651141806No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT4870.39591242774801433No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT4410.35851618200590213No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCATCCTTTCCCTCACTCTCTCC4360.3544513726861073No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACAGCCGC4180.339818059134846No Hit
CATAGACAGAAACCACCCAGACAACCACACTGACTGATACAGGAAGGCCT4080.33168844049525636No Hit
CATAGATCATGGGACTTCAGCATGGCCATCCAATAAATGGGGGCAAGGAA3510.28534961424959554No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA3340.2715292625622932No Hit
CATAGATGAAAGCCTGTTGAATTTATGACTGATACAGGAAGGCCTTTCTA3200.26014779646686775No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGGAGACAGCCGCTCACCTCTA3160.2568959490110319No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA2950.23982374986789368No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT2930.23819782613997575No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCCATCTCTA2910.23657190241205783No Hit
CATAGATTGGAACTTTGCCAGCCTTAACACTGACTGATACAGGAAGGCCT2890.2349459786841399No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGCCCTTTTTGTGTGCTTCTTTC2760.22437747445267342No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2600.21137008462933002No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCTTGACTCCACTAAAAATA2450.1991756566699456No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG2440.19836269480598664No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTAGAGA2330.18942011430243808No Hit
CATAGATCCCATCCAATAATAATGAGCACACTGTACCATGTTTTCATCCT2280.18535530498264327No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG2220.18047753379888948No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGACCTCTGTTATTCAA2200.17885161007097158No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCATCTCTA2120.17234791515929987No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAATCCCATCTCTA2120.17234791515929987No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGATGGAGACAGCCGCTCAC2120.17234791515929987No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG2080.16909606770346405No Hit
CATAGATCATGGGACTTCAGCATGGCTAAACCCTGACTCTACTTGAAACA2010.1634053346557513No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCCATCTCTA2010.1634053346557513No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGGATCATCACCACCCCAAGT1990.16177941092783338No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT1960.1593405253359565No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1940.15771460160803857No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA1900.1544627541522027No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTGGAGA1870.15202386856032585No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCAAAATGGTCAAACAGGAGGTC1800.1463331355126131No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA1770.1438942499207362No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1770.1438942499207362No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAG1760.14308128805677725No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAAACCCATCTCTA1750.1422683261928183No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1700.13820351687302349No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA1610.13088686009739284No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGATCTATCCAGGAATTT1570.127635012641557No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1550.12600908891363904No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT1480.12031835586592632No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1480.12031835586592632No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACTGATACAGGAAG1470.11950539400196736No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA1450.11787947027404944No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1410.1146276228182136No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCACCTGATT1400.11381466095425465No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA1400.11381466095425465No Hit
CATAGACACCATGCCTGGCTAATTTTACACTGACTGATACAGGAAGGCCT1370.11137577536237775No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCATCTCTA1360.11056281349841879No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTTGGAGACAGCCGCTCA1360.11056281349841879No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1320.10731096604258294No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTGGAGACAGCCG1280.10405911858674709No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTTGTCTCTA1260.10243319485882918No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)