FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807548

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807548
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences137586
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG101517.377930894131671No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG71975.230910121669355No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT67874.932914686087248No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT65804.782463332025061No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT46313.365894785806695No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT44213.213262977337811No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT42293.073713895309116No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT38032.7640893695579494No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT35882.6078234704112337No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT32082.3316325788961088No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT28082.040905324669661No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT21541.5655662640094197No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG21481.5612053551960228No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT20261.4725335426569564No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG16051.1665431075836203No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT15871.1534603811434303No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT14521.0553399328420043No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT14221.0335353887750207No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT13590.9877458462343552No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG12710.9237858503045367No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA12460.9056153969153837No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG12390.900527669966421No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC11720.851830854883491No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC11410.8292994926809414No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT11050.8031340398005611No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC10680.7762417687846147No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC10160.7384472257351765No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG9090.6606776852296018No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG8470.6156149608245025No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC7890.5734595089616676No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT7590.551654964894684No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG7570.5502013286235518No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT7250.5269431482854361No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTATAGATGTGGTTGCATGGGGGTC6860.4985972409983574No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC6750.49060224150713005No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT6620.48115360574477056No Hit
CATAGAACCTCAAGCCGGAAAACCTGTGTGTGTAAGTGGGTCTATGTGTA6470.47025133371127875No Hit
CATAGAACTAGTTCCAGCACCACCAGAGTGGGAGTCATTCATGATCTATG6280.4564417891355225No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG6250.4542613347288242No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT6210.4513540621865597No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG6170.4484467896442952No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA6090.4426322445597663No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC6080.4419054264242001No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTACGGTAGGTGGCTTCTGGTGCAT6040.43899815388193564No Hit
CATAGACACTTGACCATGCCCTTGTTCTGCTTTTACAAACTCAAGTGATT5940.4317299725262745No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG5890.4280958818484439No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT5800.4215545186283488No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT4950.35977497710522877No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT4950.35977497710522877No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC4940.35904815896966263No Hit
CATAGAACTAGTTCCAGCACCACCAGGAGTTGACAAACGACAGCTTCTAT4810.34959952320730303No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT4800.34887270507173695No Hit
CATAGAGCAGAATTTTGGGGAGAGGGAGGCATTCTTTCTCCAGACCTTCA4700.34160452371607575No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT4580.33288270608928233No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA4570.33215588795371626No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG4420.32125361592022444No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT4340.3154390708356955No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT4320.31398543456456324No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT4160.30235634439550535No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC4130.300175889988807No Hit
CATAGAGTTCCAGCAAAATGAAGGGGACAGGGGTGTGGTGTTCTGTCTAT3900.2834590728707863No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA3890.2827322547352201No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG3850.27982498219295565No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCAGCTCCTCTTCTCTTCCCTCTAT3700.2689227101594639No Hit
CATAGATTCTGTTTCTCTTCCCCCAAACCTGTGTGTGTAAGTGGGTCTAT3500.25438634744814154No Hit
CATAGATTCTGTTTCTCTTCCCCCAAATGTTTGCTATTACGAGGATGCTC3440.25002543863474486No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC3360.24421089355021586No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA3280.2383963484656869No Hit
CATAGATGAGGGATGTAGGCTGTACACCGACATGTCTCTCCCTCTCTCAC3230.23476225778785634No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT3190.23185498524559184No Hit
CATAGATTCTGTTTCTCTTCCCCCAAATACGGTAGGTGGCTTCTGGTGCA3100.22531362202549676No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG2900.2107772593141744No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC2770.20132862355181488No Hit
CATAGAACTGTCCCCTACTTTTCACCAGAACTGTCCTCTTCACCTCCCAG2730.19842135100955038No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA2410.17516317067143458No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG2360.171529079993604No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG2340.17007544372247177No Hit
CATAGACACTTGACCATGCCCTTGTTCAGACACTTGAAAGCTCCCTGGAT2300.1671681711802073No Hit
CATAGACAGGGGCCAGAACTCCTAAGTAGACAGGGGTGTGGTGTTCTGTC2290.16644135304464117No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTAGAATCTTGAACTCAGG2220.16135362609567833No Hit
CATAGAACCAACCAATAATAATGTGCTTGTTACGGTAGGTGGCTTCTGGT2220.16135362609567833No Hit
CATAGAACCAACATCTTAATAGCTAAAAGGTCTAGGATGAGATAATTGCC2210.16062680796011222No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGCAATTCTATGTGTAGAACCATGT2150.15626589914671551No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT2140.1555390810111494No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA2090.1519049903333188No Hit
CATAGAACTCTTACCCTTTTGCCAGGGAACAGAGTGGGAGTCATTCATGA2090.1519049903333188No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG2050.14899771779105433No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT1990.1446368089776576No Hit
CATAGACCAGGACAATCACAGGGCAGGGCTGCATGGTGACTTTTCTATGT1970.14318317270652536No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC1840.13373453694416582No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTGACCAGGGCTGCATGGTGACTTT1790.13010044626633524No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTACGGTTGCAGGATGAATGG1750.12719317372407077No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATTCTTTCTCCAGACCTTCATCT1720.12501271931737243No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC1690.12283226491067406No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1690.12283226491067406No Hit
CATAGAGAAGGAAAACTGGGCTGTGACACCAAAAGCACAAGTTCTATGTG1670.12137862863954181No Hit
CATAGAGGGATGGTATCAGAGAAGGCTATCTTCTGCTGCACTGCTCTATG1640.11919817423284346No Hit
CATAGACTTGTTGCCGAGACTGGAGTGCAATGGCATGATCTCGACTCACC1620.11774453796171121No Hit
CATAGAGGGATGGTATCAGAGAAGGCTACCGTACAGTTAGGCTACTTGGG1580.11483726541944674No Hit
CATAGAACTAGTTCCAGCACCACCAGTACGGTAGGTGGCTTCTGGTGCAT1560.11338362914831451No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGTCCCAAAGTAGGCAATTCTATGT1470.10684226592821945No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTTTATGACAGACCAAGGTCAAGG1420.10320817525038885No Hit
CATAGACACTTGACCATGCCCTTGTTGACACTTGAAAGCTCCCTGGATCT1380.10030090270812438No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)