FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807549

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807549
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences170618
Sequences flagged as poor quality0
Sequence length150
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4655027.283170591614013No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA112716.6059853004958455No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC84844.972511692787396No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC64383.773341616945457No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC50052.9334536801509805No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA48882.8648794382773213No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG42152.4704310213459304No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA41312.4211982323084316No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG39492.3145271893938504No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG35002.0513662098957908No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA34962.0490217913701954No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA34882.044332954319005No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT26731.5666576797289853No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC21881.2823969335005685No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT15630.9160815388763202No Hit
CATAGACTTGATGCCCAGGAAACCTCTATGAGACCAAGACTTCAGTTGAC14270.8363713090060837No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT14180.8310963673234947No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC13740.8053077635419474No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTTCTA13280.7783469504976028No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT11180.6552649779038554No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT11100.650576140852665No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC10460.6130654444431419No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG8260.4841224255354066No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGTCTAGCT7870.46126434491085344No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACAACAACATCTATGAGACCAAG7650.44837004302008No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG7220.4231675438699316No Hit
CATAGACAGGAGGAGGAAGAAGAGGACACTGACGACATGGTTCTACACAT6990.4096871373477593No Hit
CATAGAGAAGAGAAGGCGACAATGGCGTCAGTGTGAGAGGTCTTGGCAGG6210.36397097609865314No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACGACATGGTGG5720.3352518491601121No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT5260.3082910361157674No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC4840.2836746415970179No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC4370.2561277239212744No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTCAGACATGTTTCCTA4080.23913068961070932No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTGAGAGAGGTCTTGGCAGG3940.23092522477112615No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGCCTGAGATTGCTGCTATCTATG3860.22623638771993576No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA3700.21685871361755502No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT3470.20337830709538265No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC3350.1963450515185971No Hit
CATAGACAGCTCACAGACTGCATACTACACTCAGACATGTTTCCTAGTTT3290.1928284237302043No Hit
CATAGAGGGTGTTTTTCGGTGTCACAGATCTACTGGGAGAGGCTGTTTGA3200.18755348204761513No Hit
CATAGAGAAGAGAAGGCGACAATGGCTGCTTTTCTCTTCTTGGCATCTAT3080.18052022647082958No Hit
CATAGAGAAGAGAAGGCGACAATGGCATGAACTTGGGAGGCGGAGCTTGT3060.17934801720803198No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGGGACATGGATGAAGC3010.176417494051038No Hit
CATAGATCTGTGGCTCCCGATAAATGTGCTCATACAGAATTAGATCTAGC3000.1758313894196392No Hit
CATAGAGAATTTGTACACCACGGGACATGGATGAAGCTGGATCTATGAGA2990.1752452847882404No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC2850.16703981994865721No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACCGTACATGGTGGGTG2650.15531772732068128No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTGCTCATACAGAATTAGATC2620.1535594134264849No Hit
CATAGAACAAGGCCAGAATTACCCTGCACTGACGACATGGTTCTACACAT2620.1535594134264849No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC2580.15121499490088972No Hit
CATAGAGGGTGTTTTTCGGTGTCACAGATCTGGGTGAGAAATGATGATGG2580.15121499490088972No Hit
CATAGAGCTATCAGTATACTCCCACCATGGTGGGTGCCTGATTGTTCTAT2540.14887057637529452No Hit
CATAGACTTGATGCCCAGGAAACCTCATGGTGTTACTTAAAGACTTGAGA2530.14828447174389572No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC2520.14769836711249693No Hit
CATAGACCCTTAGAGTTTCAGCCTCAGACATGTTTCCTAGTTTCAGTTCT2480.14535394858690173No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACCGTATGGGCAACAGA2410.14125121616711014No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTGGGTGCCTG2390.14007900690431258No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTTCTACACA2360.13832069301011615No Hit
CATAGAGCTTCTTTCTGTTCATATTGAGGAATTCTTGCCAGGGATCTATG2340.13714848374731858No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGGACATGGATGAAGCTGGATCTA2230.1307013328019318No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG2190.1283569142763366No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCTAGAGTGAGCCCTTGT2180.1277708096449378No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAAAACTCAGACATGTTTCCTA2180.1277708096449378No Hit
CATAGACCTTCCTGTTGGCCACACAGGGACATGGATGAAGCTGGATCTAT2150.12601249575074142No Hit
CATAGATGTCTCCTAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC2100.12308197259374744No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGAGACTTGTGCTCATACAGAA2050.12015144943675345No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2010.11780703091115825No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTGGGT2000.11722092627975947No Hit
CATAGAACAATGTAATAAGCATCGGAGGACACTGACGACATGGTGGGTGC1990.11663482164836067No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTGGGTG1980.11604871701696186No Hit
CATAGATGTCTCCCAGGCTAGAGTGCTCATACAGAATTAGATCTAGCTCT1930.11311819385996788No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1860.1090154614401763No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAATTCTTGCCAGGGATCTATG1850.10842935680877751No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCCCAAAGAGTGAGCCCTTGTCCCT1840.1078432521773787No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT1800.1054988336517835No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGTCTCTGC1750.10256831049478954No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTATGTGGGCAACAGAACAACA1730.10139610123199193No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1730.10139610123199193No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1730.10139610123199193No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTATGAGACCAAGTCTCTGCTAC1710.10022389196919435No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)