FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807550

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807550
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences170618
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA4660227.313648032446753No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT116156.807605293697031No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG95945.623087833640062No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG66753.912248414586972No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA53463.1333153594579706No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA49032.873671007748303No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG45132.6450902015027724No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT42842.5108722409124478No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG40392.3672766062197423No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG36142.1181821378752534No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT35782.097082371144897No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT35422.07598260441454No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT27471.6100294224524963No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA21921.2847413520261637No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCTTGGTCTCATAGAGGTTT14670.8598154942620357No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT14370.8422323553200717No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC13490.7906551477569775No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG12990.7613499161870377No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT12230.7168059642007291No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT11130.6523344547468615No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA10620.6224431185455227No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCTCTATGTGTAGAACCATGTCGTC9390.5503522488834707No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC8930.5233914358391261No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG8820.5169442848937392No Hit
CATAGACTCACTCTGTCACCCAAGCTAGACTTGGTCTCATAGAGAAGCTT7940.46536707733064503No Hit
CATAGATGTTGTTGTTCTGCTGCTCACTCTTTGGGTTCTATGTGTAGAAC7490.4389923689176992No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCTATGTGTAGAACCATGTCG7070.4143759743989497No Hit
CATAGACAAGCCTGCCAAGACCTCTCACACTGACGCCATTGTCGCCTTCT6250.36631539462424834No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACTATGGCTTAATG5620.3293908028461241No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG5610.3288046982147253No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC4880.2860190601226131No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG4590.2690220258120479No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTAGAAGCTTTGAGATTT4150.2432334220305009No Hit
CATAGACAAGCCTGCCAAGACCTCTCTCACACTGAAACATTTTCTGGTCA3980.23326964329672134No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA3890.22799470161413213No Hit
CATAGATAGCAGCAATCTCAGGCCTCCTCTTCTTCCTCCTCCTGTCTATG3850.22565028308853696No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTAGTATGCAGTCTGTGA3370.1975172607813947No Hit
CATAGATCTCAAACAGCCTCTCCCAGTAGATCTGTGACACCGAAAAACAC3270.19165621446740672No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATTTATCGGGAGCCACAGA3120.18286464499642477No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATTGTCGCCTTCTCTTCTCTAT3100.18169243573362717No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG3030.17758970331383558No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTAACCTGTGTATATTCTCCT2970.1740730755254428No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCTCAAACTCGGC2960.173486970894044No Hit
CATAGATAGCAGCAATCTCAGGCCTCCAAACTTGGACTGAAATCTGTACC2940.17231476163124643No Hit
CATAGAACAATCAGGCACCCACCATGTACGGTAGCAGAAGCTTTGAGATT2710.15883435510907407No Hit
CATAGAGCCATCATCATTTCTCACCCAGATCTGTGACACCGAAAAACACC2700.15824825047767527No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG2650.15531772732068128No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGAAAGTTGGAACCTATC2600.1523872041636873No Hit
CATAGAACAATCAGGCACCCACCATGGTGGGAGTATACTGATAGCTCTAT2540.14887057637529452No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGGCTGAAACTCTAAGGGTCT2510.14711226248109813No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACGTGGTGTTTGGG2480.14535394858690173No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC2470.14476784395550293No Hit
CATAGATCCCTGGCAAGAATTCCTCAATATGAACAGAAAGAAGCTCTATG2450.14359563469270534No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA2430.14242342542990774No Hit
CATAGATGTTGTTGTTCTGTTGCCCATACGGTAGCAGAAGCTTTGAGATT2390.14007900690431258No Hit
CATAGATAGCAGCAATCTCAGGCCTCGTTCTATGTGTAGAACCATGTCGT2360.13832069301011615No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACCCCATATCTACC2330.13656237911591976No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTTTTCCCCAATATGAACAG2310.1353901698531222No Hit
CATAGATCCAGCTTCATCCATGTCCCTGTGTGGCCAACAGGAAGGTCTAT2230.1307013328019318No Hit
CATAGATCCAGCTTCATCCATGTCCCTCCTCTTCTTCCTCCTCCTGTCTA2210.1295291235391342No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAAGCTTTGAGAT2080.12190976333094983No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGTCTCAGAGGCAAGGGT2070.12132365869955104No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACTCTAGCCTGGGAGACATCT2040.11956534480535466No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCCTCCGATGCTTAT2040.11956534480535466No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG2030.11897924017395586No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAGGCAAGGGTAC2000.11722092627975947No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG1980.11604871701696186No Hit
CATAGATCCCTGGCAAGAATTCCCCAATATGAACAGAAAGAAGCTCTATG1950.11429040312276548No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1940.11370429849136666No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1920.11253208922856908No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1880.11018767070297389No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1880.11018767070297389No Hit
CATAGATGTTGTTGTTCTGTTGCCCACATAGAAGCTTTGAGATTTGTGTC1830.10725714754597991No Hit
CATAGATCTCAAACAGCCTCTCCCAGGCTAGAGTGCCATACCAAGAATAA1790.10491272902038472No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA1780.10432662438898592No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTAGTATGCAGTCTGTGAGCT1770.10374051975758712No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1720.10080999660059314No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)