FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807553

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807553
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences122179
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3169225.938991152325684No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC58084.753681074489069No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC42753.4989646338568816No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT35302.8892035456174954No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA32762.681311845734537No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA22051.8047291269367078No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG21741.7793565178958741No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA21351.7474361387799866No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA20771.6999648057358465No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT19311.5804680018661144No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA18601.5223565424500118No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA17611.4413278877712208No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC16611.3594807618330482No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA16091.3169202563451985No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA15501.2686304520416767No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA14951.2236145327756816No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA12631.033729200599121No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA12621.0329107293397393No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT9800.8021018341940923No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT6650.5442833874888483No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT4480.3666751242030136No Hit
CATAGATGCCCTTTTTGTGTACTTCCACAAAGTCACGAAAGTGGGTCTAT4450.3642197104248684No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG4380.35849041160919637No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG4050.33148086004959937No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT3950.3232961474557821No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACAGCCGC3830.31347449234320135No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTGGAGACAGCCGCTCAC3590.29383118211803994No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCGTCTCTA3490.2856464695242227No Hit
CATAGATCATGGGACTTCAGCATGGCTAATGCATGAAACGAGAGCAAGAA3470.2840095270054592No Hit
CATAGATCATGGGACTTCAGCATGGCTCATAAATGACCTTCTCTTCTGTC3320.2717324581147333No Hit
CATAGATCATGGGACTTCAGCATGGCCTTCCTAACCATGGGCATATCTAT3300.27009551559596984No Hit
CATAGATGCCCTTTTTGTGTACTTCCATAGAGCAGAATTACCTCTGGATG3280.26845857307720644No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGGAGACAGCCGCTCACCTCTA3040.24881526285204497No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG2860.23408278018317388No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT2740.22426112507059315No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT2600.21280252743924896No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT2440.19970698728914135No Hit
CATAGATCATGGGACTTCAGCATGGCATCCACAAAGTCACGAAAGTGGGT2370.19397768847346925No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA2350.1923407459547058No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCCATCTCTA2330.19070380343594234No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG2220.18170061958274336No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCTGTCTCTA2130.17433437824830783No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTTCAAAATGGTCAAACA2060.16860507943263572No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA2040.16696813691387227No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACTGATACAGGAAGGCCT1970.16123883809820017No Hit
CATAGATGTCCATCATGTGGAAGCTGGGCTGCCAAGGGATGGGGCAGGCG1940.158783424320055No Hit
CATAGATCATGGGACTTCAGCATGGCACTGGTACCAAAACAGAGATATAG1900.15550953928252811No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCTTGACTCCACTAAAAATA1880.15387259676376464No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG1880.15387259676376464No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1810.14814329794809256No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT1780.14568788416994738No Hit
CATAGATCATGGGACTTCAGCATGGCTATTGGAGACAGCCGCTCACCTCT1750.1432324703918022No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCGCCTCTA1710.13995858535427527No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCTGTCTCTA1680.1375031715761301No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACCCCAAGTGAGGACCAGGGTG1670.1366847003167484No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA1660.13586622905736664No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1660.13586622905736664No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCGTCTCTA1640.13422928653860322No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAATCCCATCTCTA1640.13422928653860322No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCCATCTCTACTAAAAATA1460.11949680386973212No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1450.11867833261035038No Hit
CATAGATCATGGGACTTCAGCATGGCTAGCATGGTGAAACCCCGTCTCTA1430.11704139009158694No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC1410.11540444757282348No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1410.11540444757282348No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACTCCGTCTCTA1390.11376750505406003No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCCATCTCTA1380.11294903379467829No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1330.10885667749776966No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG1320.10803820623838795No Hit
CATAGATCATGGGACTTCAGCATGGCTAACATAGTGAAACCCCGTCTCTA1310.10721973497900622No Hit
CATAGATCATGGGACTTCAGCATGGCCAACACAGTGAAACCCCATCTCTA1280.10476432120086103No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)