FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807555

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807555
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31123
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1570450.457860746072036No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA10233.286958198117148No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACGACATGGTTC7992.567233235870578No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC4361.4008932300870738No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT4231.3591234778138355No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGTCTCTGG3601.1567008321819876No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT3131.0056871124248947No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC2720.8739517398708352No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT2460.7904122353243581No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG2250.7229380201137422No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG2240.7197249622465701No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA2090.6715290942389872No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT2050.6586768627702985No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGACGACATGGTGGGTG2040.6554638049031263No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTATGGACACTTCAGTTGACTAT1720.5526459531536163No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG1660.5333676059505832No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACTGTGCTCATACAGAATTAG1580.5076631430132057No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA1510.48517173794300034No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC1360.4369758699354176No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC1250.4016322333965235No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGGCAACA1210.3887800019278347No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA960.30845355524853No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC950.30524049738135783No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT950.30524049738135783No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA900.2891752080454969No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG900.2891752080454969No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG870.27953603444398034No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG860.27632297657680815No Hit
CATAGAGGGTGTTTTTCGGTGTCACATGGTGGGTGCCTGATTGTTCTATG850.27310991870963597No Hit
CATAGATCTGTGGCTCCCGATAAATGTGCTCATACAGAATTAGATCTAGC820.2634707451081194No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGGTTGCAGATTTGGACCTGCG810.2602576872409472No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG800.25704462937377504No Hit
CATAGAGCTATCAGTATACTCCCACCATGAGGAATTCTTGCCAGGGATCT790.25383157150660285No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACTCAGACATGTTTCCTAG790.25383157150660285No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTACTTCAGTTGACTATAAG780.25061851363943066No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG770.24740545577225845No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG760.2441923979050863No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG760.2441923979050863No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG720.23134016643639754No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG700.22491405070205317No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT690.22170099283488096No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG640.20563570349902005No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTGGGTG610.19599652989750346No Hit
CATAGACCCTTAGAGTTTCAGCCTCCCAAAGTGCTGGGATTACAGATGTG600.19278347203033128No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG570.18314429842881472No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG570.18314429842881472No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACATATACACCATGGAGTACT560.17993124056164253No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGAATGACTCTTCA540.17350512482729813No Hit
TAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCGAG510.16386595122578157No Hit
CATAGAGGGTGTTTTTCGGTGTCACAGATCTATGACTTCAGTTGACTATA500.16065289335860938No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA490.1574398354914372No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG480.154226777624265No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC480.154226777624265No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG470.15101371975709282No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCTGACGACATGGTTCTACACATAG470.15101371975709282No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACGACATGGTTCTACACATAGAAC440.14137454615557626No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGACGACATGGGCAACAGAACAA420.1349484304212319No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTACTGGGTGAGAAATGATG410.1317353725540597No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTGTGCTCATACAGAATTAGATCTA400.12852231468688752No Hit
CATAGACAGCTCACAGACTGCATACTGGGAGAGGCTGTTTGAGATCTATG390.12530925681971533No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACACTGACGACATGGTGGG380.12209619895254314No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGACCATGCTC380.12209619895254314No Hit
CGTAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG370.11888314108537096No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTCAGACATGTTTCCTA370.11888314108537096No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGGGACATGGATGAAGC370.11888314108537096No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCCCAAAGAGTGAGCCCTTGTCCCT360.11567008321819877No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACATGGTTCTACACATAGAACCCA360.11567008321819877No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTTCTAC360.11567008321819877No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC350.11245702535102658No Hit
CATAGACAGCTCACAGACTGCATACTACATGGTGGGTGCCTGATTGTTCT340.1092439674838544No Hit
TATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG340.1092439674838544No Hit
CATAGATCATGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCGA340.1092439674838544No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT330.10603090961668221No Hit
CATAGACTTGATGCCCAGGAAACCTCATGGTGTTACTTAAAGACTTGAGA320.10281785174951003No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC320.10281785174951003No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCA320.10281785174951003No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGACCTATGAGA320.10281785174951003No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTGAGGCCTGAGATTGCTGC320.10281785174951003No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTTTGCAGATTTGGACCTGCG320.10281785174951003No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCATGGTTCTACACATAGAACCCAA320.10281785174951003No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)