FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807558

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807558
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44863
Sequences flagged as poor quality0
Sequence length150
%GC48

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1881141.929875398435236No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG14103.1429017230234266No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT14003.120611639881417No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG8661.9303212000980765No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG6391.4243363127744466No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA5361.1947484564117423No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA5181.1546263067561242No Hit
CATAGATAGCAGCAATCTCAGGCCTCCAAACTTGGACTGAAATCTGTACC4320.9629315917348372No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG3790.8447941510821835No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAAGCGGCACGGTCCCGG3590.8002139847981633No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCATGTCGTCAGTGTCAGGAA3240.7221986938011279No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT3200.7132826605443238No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG3150.7021376189733187No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAATCTATGACAT3080.6865345607739117No Hit
CATAGACTCACTCTGTCACCCAAGCTAGAGACTTGGTCTCATAGAGAAGC2790.6218933196620823No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCTCTATGTGTAGAACCATGTCGTC2660.5929162115774692No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT2630.5862291866348661No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC2350.5238169538372378No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCAGTGTAACCTGTGTATATT2300.5126719122662328No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT2190.48815282081002165No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT2160.4814657958674186No Hit
CATAGACTCACTCTGTCACCCAAGCTGAAGTGCAGTGGTATGATCATGGC2120.47254976261061454No Hit
CATAGATGTTGTTGTTCTGTTGCCCATAGATGTTGTTGTTCTGTTCCCCA2080.46363372935381053No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG1990.44357265452600136No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG1930.4301986046407953No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT1860.4145955464413882No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA1800.40122149655618217No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG1760.3923054632993781No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG1630.3633283552147649No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT1460.3254352138733478No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA1400.31206116398814165No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG1390.3098321556739407No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCGTCAGTGTACTATGGCTTA1220.27193901433252343No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT1120.24964893119051335No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGTGTAGAAGCTTTGAGATTTGTGT1040.23181686467690527No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1030.22958785636270426No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC1020.22735884804850323No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1020.22735884804850323No Hit
CATAGATCCCTGGCAAGAATTCCTCATCTCATAGATCCCTGGCAAGAATT920.2050687649064931No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA900.20061074827809108No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA890.19838173996389008No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG850.189465706707086No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT850.189465706707086No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA840.187236698392885No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA840.187236698392885No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA830.18500769007868398No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTAGGTAAACAAACTTCT810.18054967345028197No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGTGCCATACCAAGA800.17832066513608094No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA800.17832066513608094No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG790.17609165682187994No Hit
CATAGAGGAAAGAACAACTGCGGACGTCTCATAGAGGCAAGGGTACTATT780.17386264850767894No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA770.17163364019347793No Hit
AATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA760.1694046318792769No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGAAAGTTGGAACCTATC750.1671756235650759No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA740.1649466152508749No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC640.14265653210886478No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA610.13596950716626172No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGTGCAGAGCCTTCAGGTCA600.1337404988520607No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGGAGGTTTCCTGGGCATC590.1315114905378597No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA580.12928248222365868No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCAGTGTGCCATACCAAGAAT570.12705347390945768No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG560.12482446559525667No Hit
CATAGAGGTGAGCGGCTGTCCCCACAAGTCCGCGCAGAGCCTTCAGGTCA550.12259545728105566No Hit
CATAGAGGTGAGCGGCTGCCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA540.12036644896685465No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA530.11813744065265364No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC500.11145041571005058No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA490.10922140739584958No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA470.10476339076744756No Hit
CATAGACTCACTCTGTCACCCAAGCTAGCAGTGCAACCCCACCGGTCCCC460.10253438245324654No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)