FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807559

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807559
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences139382
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA1658211.896801595614928No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG88156.324346041813146No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC77205.538735274282189No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG73085.243144738918942No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG59594.275300971431031No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA56074.022757601411947No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG41642.9874732748848487No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA39772.8533096095622104No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA30142.162402605788409No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT27021.938557345998766No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT21581.5482630468783631No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT21491.5418059720767388No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA21281.526739464206282No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC21181.5195649366489217No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC21171.5188474838931856No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG20661.482257393350648No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG18521.3287225036231365No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG17811.277783357965878No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA17061.2239744012856755No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC14081.010173480076337No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT13971.0022814997632405No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC13720.9843451808698398No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT12690.9104475470290282No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA12590.9032730194716678No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT11690.8387022714554246No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA11160.8006772754014149No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA10920.78345840926375No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT9950.7138654919573546No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA8900.6385329526050709No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT8300.5954857872609088No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG8040.576832015611772No Hit
CATAGACAGTGCCTTTGTGCGTGTTAGGCTAATCTGAAATCTTCGTGTTC7530.5402419250692342No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG6320.453430141625174No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC6080.43621127548750915No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA5600.40177354321217945No Hit
CATAGACCGCTTCCCAATTTTTGTAACAAATGAGAAACCTGGATGCTTCT5130.36805326369258584No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGATCATTGTTCAC5040.3615961888909615No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG4720.33863770070740845No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTGCTTCTTGTGGTAACTGGTC4240.30419996843207875No Hit
CATAGACGGATTATTCTCTCCATGGTCTGTTTCCCCACTCAAATACCATC4220.3027650629206067No Hit
CATAGACAGTGCCTTTGTGCGTGTTAGGAGAGCTTCACAACCTTGAAAGG4010.2876985550501499No Hit
CATAGAGTCCAACTATTCCAGCACCACGCTGTCCTTCTCTGAATCTATGA3980.28554619678294185No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT3900.27980657473705356No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT3560.25541318104202837No Hit
CATAGACACAACAGAGAGAACGGGCTCCGAGGTCAGGAAGGAACCTGCTC3530.25326082277482026No Hit
CATAGAGTGCCTGTTTCCTCATTCGTAGAGTGTCTGTTTCCCCACTCAAA3520.2525433700190842No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGCTATACCACACTACA3500.25110846450761215No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGCAGAAGTAGGAAGTATTACCC3470.24895610624040407No Hit
CATAGAGTCCAACTATTCCAGCACCAGTCCGCTATGTAGTTCAGGTGTTC3470.24895610624040407No Hit
CATAGACGGATTATTCTCTCCATGGTCTACACTGACGCTATACCACACTA3200.2295848818355311No Hit
CATAGACGGATTATTCTCTCCATGGTCTACAAAGGATTCTGGGCCATCTA3200.2295848818355311No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGCTATACCACACT2950.21164856294213027No Hit
CATAGAGTCTGAATGGTGGGAGAGTGCTGAAGTGATGGGCTAGATCTATG2830.20303912987329784No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTGTCTGCCTCTAAGTAAAC2780.19945186609461765No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT2630.18869007475857713No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG2530.1815155472012168No Hit
CATAGACTCATTGCACTTTCCACAACTGTCACATAGAGTGTCTGTTTCCC2470.1772108306668006No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT2430.17434101964385645No Hit
CATAGACCGCTTCCCAATTTTTGTAACAACACTGACGATCATTGTTCACT2430.17434101964385645No Hit
CATAGACCAGCAGACACTCCCATCATCACTGACGACATGGTTCTACACAT2420.17362356688812042No Hit
CATAGATCAAGGAAAACACCAGCCCAACATGGTCTACCAGTTATTAGTTG2390.1714712086209123No Hit
CATAGAAATGATGCTGAAGGGCCTGCCAATAGAAATGATGCTGAAGTGAT2360.16931885035370423No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT2220.1592745117733997No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGTTCTACACATAGAGATCCCAC2150.15425234248324748No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT2120.15209998421603937No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG2090.1499476259488313No Hit
CATAGAAATGATGCTGAAGGGCCTGCCATAGAAATGATGCTGAAGTGATG2080.14923017319309523No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG1920.13775092910131867No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGTCCCAACTGTCTCTGA1920.13775092910131867No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACACATAGAAATGATGCTGAAGT1910.13703347634558266No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG1870.13416366532263851No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGACGCTATACCA1850.13272875981116644No Hit
CATAGACCAGCAGACACTCCCATCATTACGGTAGCAGCATAATTTCCCAT1810.1298589487882223No Hit
CATAGACTTGAAAGTGATAACTGAGAGGTAAACACACTGGCTCAGGTATG1800.12914149603248626No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1780.12770659052101418No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT1730.12411932674233403No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGGAGACAGCCGCTCACCTC1720.12340187398659798No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTACCAGTTATTAGTTGAATGA1700.12196696847512592No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGAGGAGCTGAGTCATG1680.12053206296365385No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGTCTTTGGAGGAATCTATGAGAC1640.1176622519407097No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA1620.11622734642923764No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCATCAGGAACCATGGGAGG1590.11407498816202953No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT1580.1133575354062935No Hit
CATAGATCAAGGAAAACACCAGCCCACTGACGACATGGTTCTACACATAG1560.11192262989482143No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCATTGCTTCTTGTGGTAAC1500.10761791336040522No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGCGACATGGTTCTACACAT1460.10474810233746107No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGAAAAATTTCTATGAGA1450.10403064958172505No Hit
CATAGACATTTAATCCTCACAATGACCCATCATAGAGTGTCTGTTTCCCC1430.10259574407025297No Hit
CATAGAAATGATGCTGAAGGGCCTGTGCTGAAGTGATGGGCTAGATCTAT1410.10116083855878091No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)