FastQCFastQC Report
Wed 8 May 2024
EGAF00005807563

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807563
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75885
Total Bases11.3 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1117814.7301838307966No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGCCATCACA1031613.594254463991568No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG51366.768135995255979No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG31614.165513606114516No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT26833.535613098767872No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA23193.0559399090729396No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA20832.744943005864137No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA18772.4734796073005207No Hit
CATAGACTTCAGCCCTCACAAGCCTTTGTACCACAGACACTGGCCCCAGG17812.346972392435923No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT13311.7539698227581206No Hit
CATAGAGCAGACAAACTTGCAAAAGACTCTTTCTGTCGGAAGGTTAATAC12861.6946695657903406No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT12851.6933517823021678No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC11901.568162350925743No Hit
CATAGACTTCAGCCCTCACAAGCCTTGGCTGTCATGATTATCACCTTCTA10371.3665414772352902No Hit
CATAGAGCCACCATGTACTTCTATATAGCTTGGCTGTCATGATTATCACC10211.345456941424524No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACACTGCCATCACAGTTCAT10051.3243724056137578No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA10021.320419055149239No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC9941.3098767872438557No Hit
CATAGAAAGTCTGGACCAAGTGCCTCCCAGACAGGATGCGCAGATGGTCT8001.0542267905383147No Hit
CATAGAACTGTTTAAGAGAAGTCAGCGAATATATTTTAGGAATTGTGAAC7180.9461685445081374No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGACGACATG6680.8802793700994926No Hit
CATAGAGCTATCTGGCAAAAACCCATCACACTGATGAGGGTATAAGGTCT5930.7814456084865257No Hit
CATAGACTTCAGCCCTCACAAGCCTTGGTATATTTTCTAAAGCCTGGGAT5250.6918363312907689No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTTGGAGGATGATCAATGC4750.6259471568821242No Hit
CATAGAGCATTACCCTCAAACTATCCCTAGACTTGGTATATTTTCTAAAG4670.6154048889767412No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACACTGACGACATGGAGGAT4470.5890492192132832No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT4340.5719180338670357No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCTAACACTTT3480.4585886538841668No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGGATGATCAATGCTGCTTCTAT3260.4295974171443632No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG2960.3900639124991764No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG2950.38874612901100347No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA2900.38215721157013904No Hit
CATAGAGCTATCTGGCAAAAACCCATCCTAGGTCAAGGTGGGAGGATGGT2190.2885945839098636No Hit
CATAGACACATGTAGGATGGGGTGGCTGTCATGATTATCACCTTCTATGA2180.28727680042169074No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC2100.2767345325163076No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTTCACTCCTGTAATCCCAGC2010.2648744811227515No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGTGCTGGGTAGTGGTAGTCT2000.2635566976345787No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGACTGTGTTAATTTAAAAGAACA1920.25301442972919547No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTTCTATGGAGGATGATCA1890.2490610792646768No Hit
CATAGATCCACAAAGACCAAGAGTGTCCCATAGAATTTCCGTTTGCTGCA1870.246425512288331No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG1690.22270540950121895No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG1610.21216314159583582No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTATATTTTCTAAAGCCTGGGATC1540.20293865717862558No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT1490.19634973973776107No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGCCAGCAAGGGAACAAAACT1270.16735850299795743No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC1260.16604071950978455No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC1210.1594518020689201No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATAGGTCAAGGTGGGAGGATG1160.1528628846280556No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT1140.15022731765170982No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGACAGCCGCTCACCTCTATGAG1120.14759175067536404No Hit
CATAGACTGGTCTCGAACTCCCAACCGACATGGTATATTTTCTAAAGCCT1100.14495618369901825No Hit
CATAGAACTCCATCATAAGTCAAAGAGCATTACCCTCAAACTATCCTCTT1090.14363840021084537No Hit
CATAGATGAAAGACAAGCAGGGAAGCCAGACAGGATGCGCAGATGGTCTA1080.14232061672267246No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGACGACATGGTATATTT1030.135731699281808No Hit
CATAGAAAGTCTGGACCAAGTGCCTCAAATGCCATGATTGTAAGTTTCTT1000.13177834881728934No Hit
CATAGAAAGTCTGGACCAAGTGCCTTACCTCAAATGCCAGGCTCTATGAG960.12650721486459773No Hit
CATAGAGCAGACAAACTTGCAAAAGACTCCATCATAGGTCAAGGTGGGAG960.12650721486459773No Hit
CATAGACACATGTAGGATGGGGTGGCTCCTGTGCTGGGTAGTGGTAGTCT930.12255386440007907No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGCTACCGTATGCCAGCAAGGGAA870.1146471634710417No Hit
CATAGAAAATAATGTGGCCGGGCATGGGCATTGCTCTTGACATCTCTATG870.1146471634710417No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAATGCCATGATTGTAAGTTTCT840.11069381300652303No Hit
CATAGAGGTGTCCTTTCCCCACTTTATCCTCTTGCCTCCGTCCCTCTATG830.10937602951835014No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCCAACCCTCTATGTGTAGATGC830.10937602951835014No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTTCACGCCTGTAATCCCAGC810.10674046254200435No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGATGTTCACTTGTAGTTCCAGC800.10542267905383146No Hit
CATAGAACCAAAAATGGCTAGGCATGTACACTGACGACATGGTATATTTT790.10410489556565856No Hit
CATAGAAGAGTGAGACTTGAGATGGGAACACTGACGACATGGAGGATGAT780.10278711207748567No Hit
CATAGACTTCAGCCCTCACAAGCCTTACACTGACGACATGGTATATTTTC770.10146932858931279No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTGTAATCCCAGC770.10146932858931279No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)