FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807564

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807564
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75885
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1113014.666930223364302No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTACTCCTATGTAATGTCT1023013.480925084008696No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG51606.799762798972128No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG31394.1365223693747115No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT30794.057455360084338No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT23453.0902022797654345No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA20682.725176253541543No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA18782.4747973907886935No Hit
CATAGAGGGACGGAGGCAAGAGGATAGCTTGAGCCTAGGAGTTTGAGGCC17712.333794557554194No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG13711.8066811622850367No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT13141.7315675034591818No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT12921.702576266719378No Hit
CATAGAACATCGCACACACATGGAACACACACACAAAAATGCATACTCTT12071.5905646702246823No Hit
CATAGAAGGTGATAATCATGACAGCCAAGGCTTGTGAGGGCTGAAGTCTA10391.369177044211636No Hit
CATAGAAGGTGATAATCATGACAGCCAAGCTATATAGAAGTACATGGTGG10271.3533636423535613No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA10251.3507280753772155No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA10061.3256901891019306No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAGCATTTTAACACAGCA10031.3217368386374118No Hit
CATAGACCATCTGCGCATCCTGTCTGGGAGGCACTTGGTCCAGACTTTCT8051.060815707979179No Hit
CATAGAAGCAGCATTGATCATCCTCCATTTTAACATCTTTAAGATCTTTA7190.9474863279963102No Hit
CATAGATGACATAGACCTTATACCCTCATCAGTGTGATGGGTTTTTGCCA5990.7893523094155631No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAAGGCTTGTGAGGGCTGAAGT5160.6799762798972129No Hit
CATAGAAGCAGCATTGATCATCCTCCAAGCAGCATTTTAACACAGCATTG4810.6338538578111617No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAAGTCTAGGGATAGTTTGAGG4700.6193582394412598No Hit
CATAGAAGCAGCATTGATCATCCTCCATGTCGTCAGTGTAGCATTTTAAC4670.6154048889767412No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGTTAGGATTACAGGCA3580.4717664887658958No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTACTCCTAT3390.44672860249061075No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT3340.4401396850497463No Hit
CATAGAGGTGAGCGGCTGTCTCCATGATCTATGTGTAGAACCATGTCGTC3250.42827963365619026No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC3040.4006061804045596No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG2910.38347499505831195No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG2510.3307636555313962No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG2450.32285695460235886No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG2260.29781906832707383No Hit
CATAGACCATCCTCCCACCTTGACCTAGGATGGGTTTTTGCCAGATAGCT2210.2912301508862094No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT2140.28200566646899916No Hit
CATAGACTACCACTACCCAGCACAGCATTTTAACACAGCATTGAAGTTCT2040.26882783158727025No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGGCACTTGGTCCAGACT1940.2556499967055413No Hit
CATAGAAGCAGCATTGATCATCCTCCATAGAAGCAGCATTTTAACACAGC1910.25169664624102256No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC1610.21216314159583582No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG1590.20952757461949004No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG1570.20689200764314425No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG1480.1950319562495882No Hit
CATAGAGATCAATCCCTGTCTACATAACCATGTCGTCAGTGTACTCCTAT1330.1752652039269948No Hit
CATAGAGATCAATCCCTGTCTACATAACCAATAGTTGTTACTACCCCCAC1320.1739474204388219No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA1250.16472293602161164No Hit
CATAGACCATCCTCCCACCTTGACCTATCCTCCCATCTCAAGTCTCACTC1250.16472293602161164No Hit
CATAGAGTTTTGTTCCCTTGCTGGCAGTGTAAAGTGGGGAAAGGACACCT1240.16340515253343876No Hit
CATAGAGAATACCATGAACTGTGATGGCAGTGTACTCCTATGTAATGTCT1190.1568162350925743No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCAGTACAGGAGCACCCTCTATGTG1160.1528628846280556No Hit
CATAGACCATCTGCGCATCCTGTCTGGCTTCCCTGCTTGTCTTTCATCTA1110.14627396718719113No Hit
CATAGAGCATACAATGAACTGTGATGGCAGTGTACTCCTATGTAATGTCT1100.14495618369901825No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGGTTGGGAGTTCGAGA1070.14100283323449958No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTAGGGATAG1050.1383672662581538No Hit
CATAGAGGGACGGAGGCAAGAGGATAGTTTGAGGGTAATGCTCTTTGACT1050.1383672662581538No Hit
CATAGACTACCACTACCCAGCACAGGAGCCACCCCATCCTACATGTGTCT990.13046056532911643No Hit
CATAGACCATCCTCCCACCTTGACCTATGATGGAGTCTTTTGCAAGTTTG970.12782499835277064No Hit
CATAGACTCAAGAAACTTACAATCATGGCATTTGAGGCACTTGGTCCAGA970.12782499835277064No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG940.12387164788825195No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCACTTGGTCCAGACTTTCTATGTG940.12387164788825195No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAATGCTGGGATTACAGGCG910.11991829742373328No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA890.11728273044738749No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCCGGCCACATTATTTTCTATG870.1146471634710417No Hit
CATAGAGTTTTGTTCCCTTGCTGGCATACGGTAGCAGAGGCACTTGGTCC850.11201159649469593No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACAGAAG850.11201159649469593No Hit
CATAGACTCAAGAAACTTACAATCATGGCATTGCTCTTTGACTTATGATG850.11201159649469593No Hit
CATAGACCATCCTCCCACCTTGACCTCCAAAGTAGCTGGAACTACAAGTG840.11069381300652303No Hit
CATAGAGAATACAATGAACTGTGATGGCATCTACACATAGAGGGTTGGAG840.11069381300652303No Hit
CATAGAGGGACGGAGGCAAGAGGATAAAGTGGGGAAAGGACACCTCTATG830.10937602951835014No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTACATGCCT790.10410489556565856No Hit
CATAGAAGCAGCATTGATCATCCTCCATGTCGTCAGTGTTCCCATCTCAA790.10410489556565856No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAACACTGACTCCTATGTAATG770.10146932858931279No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG760.1001515451011399No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)