FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807566

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807566
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences184309
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA166909.055444932151984No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT112406.0984542263264405No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT77234.190245728640489No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA66783.623263107064766No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG62663.399725461046395No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT54752.9705548833752013No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA50032.71446321123765No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA30021.628786440162987No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT29441.5973175482477797No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA28741.5593378511087357No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG28031.5208155868677058No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA26551.440515655773728No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG22131.2007009966957665No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA21531.1681469705765861No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA20371.1052091867461709No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA18871.0238241214482202No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT17850.9684822770456135No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG15850.859968856648346No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT15220.8257871292232066No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC14540.7888925662881358No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT13030.7069649338881987No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT13010.7058797996842259No Hit
CATAGACCCCCTTGAGTTCACTGGACATAGGAGGAGCTGACTTACTGTTC12780.6934007563385401No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC11890.645112284261756No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA11550.6266650027942207No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGACTCTGTTTACTCGGAGA11310.6136433923465485No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT10550.5724082925955868No Hit
CATAGAGTCCTTCCCTCTCACACATGTGTAGAACCACATAGGGCACTGAG9970.5409394006803792No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC9580.5197792837029119No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGCCCCAGGTAGCAAAACA9370.5083853745611989No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC9340.5067576732552399No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT9280.5035022706433219No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATAGGAGGAGCTGACTTACTG9210.4997043009294174No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT9180.4980765996234584No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC8660.46986311032016886No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG8370.45412866436256505No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTTGGGAAAGGTATGT8100.4394793526089339No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGCATTCTCTCAG7940.4307982789771525No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC7630.413978698815576No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGAGGAGAATGATATTGTT7600.41235099750961696No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCCATTCTCTCAGGGCTGTTCT7530.4085530277957127No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGGCAACATATCAGAAGCATCTA7050.3825098069003684No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG7040.38196723979838204No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC6900.3743713003705733No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG6810.36948819645269626No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGCCCCAGGTAGCAAAAC6790.3684030622487236No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT6500.35266861629111984No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA6410.3477855123732428No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTAGTGGGAAAGGTATGTGGC6370.3456152439652974No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG6140.33313620061961163No Hit
CATAGATATTCTGCCCCCTCCTCTCCCCAGGTAGCAAAACAGAGTCTATG6130.3325936335176253No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCGTTTTCTGTTTACTCGGA6050.3282530967017346No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA5970.3239125598858439No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC5670.30763554682625377No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA5140.2788794904209778No Hit
CATAGAAACAGCAAAGCCCTCCACCACCTCAGGAAACATTGGAAAGATGG5120.27779435621700516No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCACTTACTAACAAAGCGCTTCCT4940.26802814838125105No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT4840.2626024773613877No Hit
CATAGAGTCCTTCCCTCTCACACATGTATATCTAGGAGTAGAACTGCTGG4710.25554910503556527No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA4660.2528362695256336No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGGAGCTGACTTACTGTTCTATG4640.25175113532166093No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCTTACACTGCACATGGGGTCTAT4220.22896331703823472No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT4210.22842074993624836No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAATCTTTGGGAGGCTATTAG4160.22570791442631669No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG4140.224622780222344No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAGATTAGAGGAGAATGATATTGTT4090.2219099447124123No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATAGGAGGAGCTGACT4070.22082481050843963No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGGTCACTGACAGGTCTTAAAG4070.22082481050843963No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA3880.2105160355706992No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT3750.20346266324487683No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATGGGTAGAGAGTTCT3630.19695185802104076No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA3630.19695185802104076No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGAAGTGTATTAATTATCTAT3610.1958667238170681No Hit
CATAGACCACACACACAACTGAGAGGAGAATGATATTGTTGCAGATTTCT3570.19369645540912273No Hit
CATAGACCATCCCTTCTACAAGAGGCACGATCTGTTTACTCGGAGATTTG3570.19369645540912273No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT3400.18447281467535498No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC3280.1779620094515189No Hit
CATAGATATTCTGCCCCCTCCTCTCCACACTGGGAAAGGTATGTGGCACA3150.1709086371256965No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAGAGAGGAGAATGATATTGTTGCA3120.1692809358197375No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCCCAGGTAGCAAAACAGAGTCTA3090.1676532345137785No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA3050.16548296610583313No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA3000.16277013059590145No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG2980.16168499639192876No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA2960.1605998621879561No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA2950.16005729508596975No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTGGGAAAGGTATGTG2710.14703568463829764No Hit
CATAGACCATCCCTTCTACAAGAGGCACGATCTTGCTCCTTCTCACACAA2620.14215258072042058No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGGAATCTTTGGGAGGCTATTA2620.14215258072042058No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAAATACAAAACTTATCTGGGCA2600.14106744651644793No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAACCAAAATGTCAGGGGA2580.13998231231247524No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG2510.13618434259857087No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGTAGAGAGTTCTG2490.13509920839459819No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTGAGGAGAATGATAT2480.13455664129261188No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTAGCATTCTCTCAGGGCTGT2410.1307586715787075No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGCATTCTCTCAGGGCTGTTCTCTA2410.1307586715787075No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTAGGGGAAAAGGGATAGGAG2360.12804583606877581No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCAGTCCATCCAGTCCAGCTCC2330.1264181347628168No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT2270.12316273215089878No Hit
CATAGAAGTACCATCAGAGTGAACCGGGCAGAGAGTGTGTTGTATTCTAT2170.11773706113103538No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT2060.11176882300918566No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGTTAATGGCTTCCA2050.11122625590719933No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA2050.11122625590719933No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAACGGCTTCCA2020.10959855460124031No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAAATACAAAAAACTTATCTGGG1960.10634315198932227No Hit
CATAGACCATCCCTTCTACAAGAGGCATACGGTAGCAGAGACCTTTTTCT1950.10580058488733596No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCCATCAACCCGCCATCTACATT1940.1052580177853496No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT1920.10417288358137694No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC1910.10363031647939058No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAACTACAAAACTTATCTGGGCA1890.10254518227541792No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)