FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807567

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807567
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103833
Sequences flagged as poor quality0
Sequence length150
%GC44

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3156430.39881347933701No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGCCATCACA1257112.106940953261487No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG44654.300174318376624No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG27672.664856066953666No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC24692.377856750743983No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT21962.1149345583773944No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA16241.564049964847399No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA15741.5158957171612106No Hit
CATAGACTTCAGCCCTCACAAGCCTTTGTACCACAGACACTGGCCCCAGG15701.5120433773463158No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT12291.183631408126511No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGACGACATG11981.1537757745610742No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT8980.8648502884439437No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA8530.8215114655263742No Hit
CATAGACTTCAGCCCTCACAAGCCTTGGTATATTTTCTAAAGCCTGGGAT7160.6895688268662179No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT6860.6606762782545048No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGCCATCACAGTTCATTG6110.5884449067252222No Hit
CATAGAGCCACCATGTACTTCTATATAGCTTGCCATCACAGTTCATTGTA5840.5624416129746804No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT5550.5345121493166912No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT4940.47576396713954133No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT4890.4709485423709225No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT4430.4266466344996292No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA4280.4122003601937727No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA3900.3756031319522695No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT3820.36789845232247936No Hit
CATAGAACTGTTTAAGAGAAGTCAGCGAGTTGCAATATAGATGAAATGCC3510.33804281875704256No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC3400.3274488842660811No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC3270.31492877986767215No Hit
CATAGACTTCAGCCCTCACAAGCCTTGGTGGTATATTTTCTAAAGCCTGG3230.31107644005277707No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC3110.29951942060809184No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTGCTTTCTTGAAGA3030.2918147409783017No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGGATGATCAATGCTGCTTCTAT2800.26966378704265503No Hit
CATAGAACCAAAAATGGCTAGGCATGGTGGCTCACACCTGTAATCACAGC2730.26292219236658865No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAGTCTATGAGACCAAGTCTCTG2600.25040208796817964No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG2460.23691889861604692No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC2440.23499272870859939No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTTCACTCCTGTAATCCCAGC2430.23402964375487562No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG2420.23306655880115185No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC2390.23017730393998054No Hit
CATAGACACATGTAGGATGGGGTGGCTGTCATGATTATCACCTTCTATGA2360.22728804907880926No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT2200.21187868981922897No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCTAACACTTT2090.20128475532826753No Hit
CATAGACACATGTAGGATGGGGTGGCTCACGTGTGTAATCTCAGCACTTT2030.1955062456059249No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG1980.19069082083730607No Hit
CATAGAACCAAAAATGGCTAGGCATGTGTACCAGTAGCAAGATAGGACAG1960.18876465092985853No Hit
CATAGAACTCCATCATAAGTCAAAGAGCATTACCCTCAAACTATCCTCTT1920.18491231111496345No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTTCCCCTTCTGCCATGATTGTAAG1860.17913380139262083No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGACGACATGGTATATTT1860.17913380139262083No Hit
CATAGAGGTGTCCTTTCCCCACTTTACTCAGCACTTCTCTCTCCTGCTAT1740.16757678194793563No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT1670.16083518727186924No Hit
CATAGATGAAAGACAAGCAGGGAAGCCAGACAGGATGCGCAGATGGTCTA1670.16083518727186924No Hit
CATAGATCCACAAAGACCAAGAGTGTCAGTGTGCCATGATTGTAAGTTTC1630.1569828474569742No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAATGCCATCACAGTTCATTGTA1600.15409359259580288No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCGTGTCATCCCAGCCCTTT1600.15409359259580288No Hit
CATAGAACCAAAAATGGCTAGGCATGTCTATGAGGGTCTGTTCGGCCACT1510.14542582801228895No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTTCCATGTGTGTGCG1480.14253657315111765No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1420.13675806342877506No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAACCCTAGCACTTT1400.13483189352132752No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTACAGATTTGGACCTGCG1320.12712721389153736No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1260.12134870416919477No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1210.11653327940057592No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1200.11557019444685215No Hit
AATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1180.11364402453940463No Hit
CATAGAGGTGTCCTTTCCCCACTTTATCTCTTCCTCCTGCTCTGGCCATG1170.11268093958568086No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1160.11171785463195709No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG1160.11171785463195709No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1150.11075476967823332No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1100.10593934490961449No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTGTAATCCCAGC1080.10401317500216695No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCGCTTCTGTAATCTCAGC1070.10305009004844318No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTGTGTGCCTGTAGTCCCAGC1070.10305009004844318No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGTGCTGGGTAGTGGTAGTCT1040.10016083518727187No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)