FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807571

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807571
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences177968
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC117826.620291288321496No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC92245.182954238964308No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA83344.682864335161377No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA79114.4451811561629055No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA55183.100557403578171No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA52612.9561494201204708No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT49632.788703587161737No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA48992.7527420659893913No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA44152.480783062123528No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT38632.170614942012047No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT34841.9576553088195632No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA26841.5081362941652432No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC26831.5075743953969254No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG25611.4390227456621414No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC23061.295738559741077No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA19961.121549941562528No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT19821.1136833588060775No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG19681.105816776049627No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA18931.0636743684257843No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC17901.0057987952890408No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT17360.9754562617998742No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG15730.8838667625640565No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG13670.7681156162905691No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT13120.7372111840330846No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC12730.7152971320686865No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG12070.6782118133597052No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT11680.656297761395307No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT10930.6141553537714646No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT10830.6085363660882855No Hit
CATAGAATTCCCCAATGTCCTGTGCATCGGCCGCACTGAAATTGTCTATG10820.6079744673199676No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG10520.5911175042704306No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA10320.5798795289040726No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA9810.5512226917198598No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC9690.544479906500045No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT9670.5433561089634091No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT9530.5354895262069586No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA9490.5332419311336869No Hit
CATAGAGACCCCCAAGTAGCCTAACTGAGGTTCTTCAACACAGCTATTCT9470.5321181335970512No Hit
CATAGACAGAACACCACACCCCTGTCTACTTAGGAGTTCTGGCCCCTGTC9430.5298705385237795No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA8420.4731187629236717No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA8350.4691854715454464No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA7990.448957115886002No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG7290.409624202103749No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTTGGTGAAAAGTAGGGGACAGTTC7030.3950148341274836No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG6940.3899577452126225No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGGTGAAAAGTAGGGGACAGTT6890.387148251371033No Hit
CATAGACAGTCCTGCCGTGTACATGTACAAACCAAACAATAGCCAGTCTA6260.3517486289670053No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA6000.33713926099073993No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG5960.33489166591746833No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG5850.3287107794659714No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGTGTACAGCCTACATCCCT5790.325339386856064No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA5600.3146633102580239No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA5570.3129776139530702No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT5490.308482423806527No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTTGCCAAGATTGTAGGAGTAG5490.308482423806527No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA5200.29218735952530794No Hit
CATAGATGCACCAGAAGCCACCTACCCACAGCCCAGTTTTCCTTCTCTAT5150.2893778656837184No Hit
CATAGAAAAGTCACCATGCAGCCCTGAGGTTCTTCAACACAGCTATTCTA5120.28769216937876474No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA5120.28769216937876474No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT5050.28375887800053945No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA4990.280387485390632No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA4930.27701609278072464No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTAGAACAAGGGCATGGTCAAGTG4930.27701609278072464No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCCCCCAAGTATATGACACATTAC4750.2669019149510024No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA4660.26184482603614134No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC4630.26015912973118765No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCACACTGACGAAAGGTTTTCCG4610.2590353321945518No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT4490.252292546974737No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA4430.24892115436482964No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA4420.24835925559651173No Hit
CATAGAGACCCCCAAGTAGCCTAACTGTAGATCTGGGAGGAACAGGGAGA4330.2433021666816506No Hit
CATAGACCATGTAATACCATCGTGAGCAGTCACTCAAATATAGACCTCAA4210.23655938146183586No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT4210.23655938146183586No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA4070.22869279870538525No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC3960.22251191225388833No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT3960.22251191225388833No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACTTTGTTCCCTGGCTTCTCT3740.21015013935089455No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3610.20284545536276183No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC3540.19891216398453654No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACTTAGGAGTTCTGGCCC3490.19610267014294702No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGAAAATGTCAGTGGGCCA3390.19048368245976804No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGAATTGATCTAGCTTCGGAATGT3270.18374089723995324No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT3230.18149330216668164No Hit
CATAGAAGGGCAATTATCTCATCCTAGACTAGAAGGGCAAGTGTATGGTC3180.17868380832509215No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA3140.17643621325182057No Hit
CATAGACAGTCCTGCCGTGTACATGTGTTAAGTGTGCCCTGTGATTGTCC3140.17643621325182057No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCGACATGGTTCTACACATAGAGA3000.16856963049536997No Hit
CATAGAATTGCCTACTTTGGGACCCATCGGCCGCACTGAAATTGTCTATG2970.16688393419041625No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTCCAACTCTATAGATTATGCT2850.16014114897060144No Hit
CATAGATGCACCAGAAGCCACCTACCTTCTCAGCTCTATGAGACAGTCAC2820.15845545266564776No Hit
CATAGATTTGGCACTCACATACACGCCTAGTTCCAACTCTATAGATTATG2790.15676975636069404No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCATAGACACTGACGACATGGTT2720.15283646498246875No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC2630.14777937606760766No Hit
CATAGATGCACCAGAAGCCACCTACCCCCAAGTATATGACACATTACACC2620.14721747729928977No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA2600.14609367976265397No Hit
CATAGAACTTGTGCTTTTGGTGTCACCACAGCCCAGTTTTCCTTCTCTAT2470.13878899577452125No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC2440.13710329946956756No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA2380.13373190685966016No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT2370.13317000809134225No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT2350.13204621055470647No Hit
CATAGACAGTCCTGCCGTGTACATGTCTACAATCCTGGCAAAAGGGTAAG2320.13036051424975276No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCTCTGCTACC2320.13036051424975276No Hit
CATAGAAGGGCAATTATCTCATCCTAGACCTTTTAGCTATTAAGATGTTG2240.12586532410320958No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT2230.12530342533489167No Hit
CATAGACCCCCATGCAACCACATCTATACAATGGGCACACTTAACACCTC2220.12474152656657377No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC2190.12305583026162006No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT2180.12249393149330216No Hit
CATAGAATCCCTGCCCTTGACCTTGGCTCTCTTCCGCCTTTATCCTTCTA2080.11687494381012317No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGTCCATTTTTGGTTCTCTTCTAT2060.11575114627348736No Hit
CATAGACAGTCCTGCCGTGTACATGTGCCCTGTGATTGTCCTGGTCTATG2060.11575114627348736No Hit
CATAGAATTGCCTACTTTGGGACCCAAGTATATGACACATTACACCAGTC2020.11350355120021577No Hit
CATAGAATCCCTGCCCTTGACCTTGGATAGAATCCCTCCCTTGTCCTTGC2010.11294165243189787No Hit
CATAGACCCCCATGCAACCACATCTATGAGGAATTAGAGCCAGTTCTGAG1980.11125595612694417No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTAGAACAAGGGCATGGTCA1950.10957025982199046No Hit
CATAGATCATGAATGACTCCCACTCTGTTCCCTGGCAAAAGGGTAAGAGT1900.10676076598040098No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC1890.10619886721208308No Hit
CATAGATCTGGGAGGTGAAGAGGACACACTGACGACATGGTTCTACACAT1890.10619886721208308No Hit
CATAGAATTGCCTACTTTGGGACCCAGTCACAATGGGCACACTTAACACC1870.10507506967544727No Hit
CATAGATCTGGGAGGTGAAGAGGACAATGGGCACACTTAACACCTCTATG1850.10395127213881146No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTGGTGAAAAGTAGGGGACAGTTCT1840.10338937337049357No Hit
CATAGATGTCCCCATTCATCCTGCAACAGGGCAAGTGTATGGTCAGTTCT1810.10170367706553987No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)