FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807575

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807575
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences106880
Sequences flagged as poor quality0
Sequence length150
%GC40

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG80867.565494011976048No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA48954.579902694610778No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA38773.627432634730539No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG37023.4636976047904193No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG35673.3373877245508985No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA29542.7638473053892216No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT21742.0340568862275448No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA19721.8450598802395208No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG16451.5391092814371259No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA15401.440868263473054No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA15231.4249625748502994No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC14801.3847305389221556No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA12511.1704715568862276No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA12121.1339820359281436No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT9870.9234655688622754No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT8510.7962200598802396No Hit
CATAGAGAACAGCCCTGAGAGAATGCACACTGACGACATGGTTCTACACA8480.7934131736526946No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT8440.7896706586826348No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA8010.749438622754491No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG8000.7485029940119761No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC7950.7438248502994012No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG7790.7288547904191617No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT7630.7138847305389222No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG7500.7017215568862275No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT7450.6970434131736527No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACATCATGTCTATGAGAC6940.6493263473053892No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT6750.6315494011976048No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG6640.6212574850299402No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC6290.5885104790419162No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT6270.5866392215568862No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACCTCTATGAGACCAAG6150.5754116766467066No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTACAGGTGCAAATTGTCAGTGT6000.561377245508982No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGGTGGGGAAAGAGAGCACTCTAT5400.5052395209580838No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA5390.5043038922155688No Hit
CATAGATGTGGTCTCAGTGCCCTATGTACGGAGATAGAGAGGTTGGTTCT5330.49869011976047906No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA5300.4958832335329341No Hit
CATAGATGTGCCACATACCTTTCCCATAGAACAGCTAAAAATCTTGGAGC5300.4958832335329341No Hit
CATAGATGCTTCTGATATGTTGCCGTACATAGAACAGCTAAAAATCTTGG5210.48746257485029937No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA5210.48746257485029937No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA4870.4556511976047904No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGTGTGAGAGGG4360.407934131736527No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCAGGTGCAAATTGTCAGTGTGTC4330.40512724550898205No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTATGGCAAACTAACAC4150.38828592814371254No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCATAGATGCTCAGATCTCAAAAGG4100.3836077844311377No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACGGACTACAAGTACCCACCAC3910.3658308383233533No Hit
CATAGAGAACAGCCCTGAGAGAATGCCATAGAGAACAGCTAAAAATCTTG3820.35741017964071853No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC3790.35460329341317365No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGGCAAACTAACACA3750.35086077844311375No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACACATAGAACAGCTAA3670.343375748502994No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCTGGTCATTCTTCTCTGGGGGCT3670.343375748502994No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA3650.3415044910179641No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG3640.3405688622754491No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAACAGCTAAAAATCTTGGAGCT3620.33869760479041916No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACTGACGACATGGTTCTACACA3460.32372754491017963No Hit
CATAGAATACAACACACTCTCTGCCCTGTACACGGACTACAAGTACCCAC3450.32279191616766467No Hit
CATAGATGCTTCTGATATGTTGCCGTACACTGACGACATGGTTCTACACA3350.31343562874251496No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC3330.31156437125748504No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTGTCCAGTGAACTCAAGGGGGT2980.27881736526946105No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACACATAGAACAGCTAAAAA2940.27507485029940115No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG2930.27413922155688625No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC2910.27226796407185627No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCTACACATAGAGAACAGCTAAAA2890.27039670658682635No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA2770.2591691616766467No Hit
CATAGAGAACATTAGCTTAGTTAATTAGGGAGATCTATGAGACCAAGTCT2730.2554266467065868No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCCTTGGAGAGAAATGCTGCT2690.251684131736527No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTGGGGAAAGAGAGCACT2570.2404565868263473No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT2550.23858532934131738No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCATAGACCAAAGCTAGAAA2550.23858532934131738No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGCAGCAACAAAAGTCACT2540.2376497005988024No Hit
CATAGACTCTGTTTTGCTACCTGGGGCATAGAACAGCTAAAAATCTTGGA2520.23577844311377244No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACGGACTACAAGTACCCACCAC2510.23484281437125748No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG2500.2339071856287425No Hit
CATAGATCATGGGACTTCAGCATGGCACAACTGGCATCTGGTGATCTATG2490.23297155688622753No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG2480.2320359281437126No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT2440.2282934131736527No Hit
CATAGATGTGCCACATACCTTTCCCATGTCCTTGGAGAGAAATGCTGCTC2360.2208083832335329No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA2290.21425898203592814No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTATAGACCAAAGCTAGAAACTC2280.21332335329341318No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCCTCATTATCCCTGTGCCT2260.21145209580838323No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA2230.20864520958083832No Hit
CATAGATGTGCCACATACCTTTCCCAGACTCTATGTACAGTGAAACAAGA2210.20677395209580837No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGACGACATGGTCCTAC2200.20583832335329344No Hit
CATAGAGAACAGCCCTGAGAGAATGCTAGAGAACAGCTAAAAATCTTGGA2170.2030314371257485No Hit
CATAGAAGGAGCTGGACTGGATGGACTCTATGAGACCAAGTCTCTGCTAC2140.2002245508982036No Hit
CATAGACTCTGTTTTGCTACCTGGGGCGACATGTGTGAGAGGGAAGGACT2120.19835329341317365No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT2100.1964820359281437No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT2090.19554640718562874No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTGCAG2090.19554640718562874No Hit
CATAGAACATCTACAGAACTCTCTACCCACACATAGAACAGCTAAAAATC2080.19461077844311378No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACGGACTACAAGTACCCAC2080.19461077844311378No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACATAGAACAGCTAAAA2080.19461077844311378No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT2020.18899700598802396No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACAGAATCAGGCTGAGAAAGG2000.18712574850299402No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT1980.18525449101796407No Hit
CATAGAATACAACACACTCTCTGCCCTGGGTTCTGCACATCTACAAGGAC1970.18431886227544908No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCGGTCATTCTTCTCTGGGGGCTC1920.17964071856287425No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCTCTATGAGACCAAGTCTC1920.17964071856287425No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGCTGAGATTGGCCTGTGTCT1910.17870508982035926No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGCAGAGGACAGGTATCTATGAG1880.17589820359281438No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTCTGCTACCGTATGGTGGAGG1850.17309131736526945No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACGGCTGAGAAAG1830.1712200598802395No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1820.17028443113772454No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGATAGAACAGCTAAAAATCTT1820.17028443113772454No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATGTGTAGAACAGAACA1820.17028443113772454No Hit
CATAGACAGCTGGGGTGGGAGGTTAGTTAATTAGGGAGATCTATGAGACC1790.16747754491017963No Hit
CGGACTACAAGTACCCACCACCTCTATGAGACCAAGTCTCTGCTACCGTA1770.16560628742514968No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCACATAGAACAGCTAAA1770.16560628742514968No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA1750.16373502994011974No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGGTGGAGGGCT1750.16373502994011974No Hit
CATAGAGGCATAGTATTGAAACTGTAGATCACTCTATGGGCTGAGAAAGG1740.1627994011976048No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCTACACCTAGAACAGCT1740.1627994011976048No Hit
CATAGAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCT1720.16092814371257486No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC1680.15718562874251496No Hit
CATAGAGCCTCCACTCTTCTCGCTATCCCTGTGCCTCTTGTAGAAGGGAT1680.15718562874251496No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAATCTGCAGCAACAAAAG1640.1534431137724551No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACAGTGAAACAAGATCGTGCCT1630.1525074850299401No Hit
CATAGACCCTCCTATCCCTTTTCCCCACACTGACGACATGGTTCTACACA1620.15157185628742514No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTTTCTACACATAGAACAG1620.15157185628742514No Hit
CATAGATGCTTCTGATATGTTGCCGTACACTGACGACATGTTCTACCATA1600.14970059880239522No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG1600.14970059880239522No Hit
CATAGACTCTGTTTTGCTACCTGGGGCACATAGAGAACAGCTAAAAATCT1590.14876497005988024No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCATAGATCCCATACTCCCTCATTA1570.1468937125748503No Hit
CATAGAGCCTCCACTCTTCTCGCTATCACACGGACTACAAGTACCCACCA1550.14502245508982034No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACACCTCTAACTTCATAG1540.14408682634730538No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCAGGACACTTTGGACTC1540.14408682634730538No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAAGCTAGAA1500.1403443113772455No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGTGTGAGAGGG1480.13847305389221556No Hit
CATAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCTAC1460.13660179640718564No Hit
CATAGACCTGTGTGTGAGGCATTGTTATAGATCTCCCTCATTATCCCTGT1440.1347305389221557No Hit
CATAGATGCCTCAAAGAGCTGAAGACACAGGGTGGGGAAAGAGAGCACTC1430.1337949101796407No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGACGACATGTGTGAG1400.1309880239520958No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGCAGCAACAAAAGTCA1360.12724550898203593No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTGTTCACTCTGATGGTACTTCT1350.12630988023952094No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1340.12537425149700598No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA1320.12350299401197606No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACTGACGACATGTGTGAGA1310.12256736526946109No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACAAGGACACTTTGGAC1290.12069610778443114No Hit
CATAGAAGTGACCCTCAGCTCAGTGACTCTCAGTTGTGTGTGTGGTCTAT1290.12069610778443114No Hit
CATAGAACATCTACAGAACTCTCTACCCATCTATGAGACCAAAGCTAGAA1270.1188248502994012No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGCTACCGTAGGCTGAGAAAGG1260.11788922155688622No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGACGACATGGCTCAC1260.11788922155688622No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA1260.11788922155688622No Hit
CATAGATGCTTCTGATATGTTGCCGTTCTGATATGTTGCCTTTCCTCAGT1250.11695359281437125No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTACACTGACGACATGGTTCTAC1220.11414670658682635No Hit
CATAGATGTGCCACATACCTTTCCCATACTCCCTCATTATCCCTGTGCCT1200.1122754491017964No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGGTTCTACACA1140.10666167664670659No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAAGCTCTGCCTCCTGGGTTCACAC1130.10572604790419161No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGAGACAGCCGCTCACCTCTATG1100.10291916167664672No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)